KEGG   Pangasianodon hypophthalmus (striped catfish): 113537620
Entry
113537620         CDS       T05759                                 
Symbol
aplf
Name
(RefSeq) aprataxin and PNK-like factor isoform X1
  KO
K13295  aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phyp03400]
    113537620 (aplf)
DNA repair and recombination proteins [BR:phyp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     113537620 (aplf)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     113537620 (aplf)
SSDB
Motif
Pfam: zf-CCHH FHA_2 FHA Yop-YscD_cpl
Other DBs
NCBI-GeneID: 113537620
NCBI-ProteinID: XP_026788015
Position
Unknown
AA seq 495 aa
MPGFELEQVDGGGEPINLPHGDTVIGRGPFLSVSDKRVSRNHAILENMDGQLRLKPTHVN
PCFVQTSLDASPQPLEKDQWHCLKDGSIFSLLPGKHIFRVRAVAEEGTPRNSQGFEKEEE
EVMETASEMEQNSKSSRSCEETLAYTPQAKNRLSFTYESKMRDEAHTADPAACNQAGVDS
RSSCKSDTPSPLTPCKKRVLPAWMMDVTPATLKTPPAKVAAKRAPARAPARNTPSSKPSG
PKRPRTRLPSLSGEEEEEKGVEEDEEEGCSTAPRKRARRLKSDTEESQDQAPVSESSQET
PPEDEDAKEANVVQKTDEEDKEKESKRAEGSRRSKAGGSTLRPESSGSSQTNVQQKAKVQ
RRTPCPYGTSCYRKNPIHFQECSHPGDGDYEEEQNNEDDEDDDRPECPYGTDCYRKNPLH
KKEYKHTKPPEKKTAPVDDDDDDDEDQYENSFINDESEEEDVDEDSDYVPESEDSGKEDV
KRLQKEAKAFLRRKK
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgccaggctttgagttggagcaggtggatggaggaggagagcccattaacctgccacac
ggagacactgtgatcgggagaggaccatttctgagcgtgagtgataaacgagtgtccagg
aaccatgcgattctggagaacatggatggacagctgcgtctcaaacccacgcatgtgaac
ccctgtttcgttcagacgtctctggatgcgtcgccacaaccgctagagaaggaccaatgg
cactgcctgaaggatggatccatcttctccctgctcccggggaaacacatcttcagagtc
cgtgctgtagcagaggaaggaacacccaggaacagccagggttttgagaaggaggaggag
gaggtgatggagacggcgtcagagatggagcagaactctaaatcctcccgatcgtgtgag
gagacattagcgtacactcctcaggccaagaacagactgtctttcacctacgagtcaaag
atgagagacgaggcccacacagcagaccctgctgcatgtaaccaggctggtgttgattct
cgctcttcttgtaaatctgacactccttcccccctgacgccttgtaaaaaaagagttctt
cctgcttggatgatggacgtcactcctgcaaccctgaagacaccaccagcgaaagtagca
gcgaaacgagctccagcacgagctccagcccgaaacacaccttcatccaaaccctcagga
cccaaacgaccccggactagactgccttcgttatcaggagaggaggaagaggagaaaggg
gttgaagaggacgaggaggaaggatgcagcacggcccccagaaagagagcgaggaggctg
aaaagtgacacggaggagagccaggaccaggctccggtgtcagagtccagccaagagacg
ccaccggaggacgaagacgccaaagaggctaatgtagtgcagaaaacggacgaagaggac
aaggaaaaagaaagtaagagagctgagggcagtcggaggtccaaagctggaggctcaacc
ttaaggccggaaagctccggaagctcgcagacaaacgtgcagcagaaggctaaagttcag
cgcaggacgccgtgtccctatggcacctcctgttacaggaaaaacccgatccattttcag
gagtgcagtcaccccggagacggcgactatgaggaagagcaaaacaacgaggatgacgaa
gatgacgatcggccggagtgtccgtacggcactgactgctacaggaagaatccactacac
aaaaaagagtacaagcacaccaaacctccagaaaagaagactgcaccagttgatgacgat
gatgatgatgatgaagaccaatatgagaacagcttcattaatgacgaaagcgaggaagag
gatgtggacgaggattctgactacgttcccgagtcggaggacagcgggaaagaggacgtt
aaacggctgcagaaggaggccaaagcctttctccggaggaagaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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