KEGG   Pangasianodon hypophthalmus (striped catfish): 113540870
Entry
113540870         CDS       T05759                                 
Symbol
cdh5
Name
(RefSeq) cadherin-5
  KO
K06533  cadherin 5, type 2, VE-cadherin
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04514  Cell adhesion molecules
phyp04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    113540870 (cdh5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    113540870 (cdh5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:phyp04515]
    113540870 (cdh5)
   04090 CD molecules [BR:phyp04090]
    113540870 (cdh5)
Cell adhesion molecules [BR:phyp04515]
 Cadherins
  Major cadherins
   113540870 (cdh5)
CD molecules [BR:phyp04090]
 Proteins
  113540870 (cdh5)
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_3 Cadherin_2 Cadherin_4 FctA Big_9 MACPF_D2
Other DBs
NCBI-GeneID: 113540870
NCBI-ProteinID: XP_026793299
Position
Unknown
AA seq 758 aa
MMIRSVGKRAVRTFLWTAFLHFIFTGAEHDEDVSKSSVLQREKREWQWNMLLVYEEKQPQ
NPPEKIGRLKNTFFNKNAAFRLSGDGAGDTFSLNEFGEVLVLKKLDRETISSYTLKAQII
DSTNGRKLEEDTEFTIQVQDINDHTPVFSGPYTGFVNERAERGTVVMKVRATDKDDPSTP
NGIVTYKLLNGTSFFRISDKTGEIFTTVDTLDRETQSEYTLMVQASDMPGLEGGRSASTV
VTISIHDINDNVAMFSKQSYHFVVKEDVPVGFKIGTLDIKDRDEKQNKKPIFTVDHSHKD
IFDLELNENNDGVLTLKKGLDYEMKKRYTFTVTVKENVAQPPDNTNPRTSAQIDITVEDV
DEPPVFTKAEYTFNVTEGQKNIIVGSVSAKDPDKDSYRIRYSIKDPSSPVNINSETGQLT
LKTALDRETYDVHVFHVTAEEESTRKLDSYAMVRINVLDINDNDPDLAEGSDVYICEKDE
SGTVIGVIGAIDKDENPGKFRFSLAGKSSNFSLYDNLNNTASVILTHGGFSTQRSVENIL
EIEITDGGTPPRKSIRPVHVRVCACRSERQIEYCAAYSKSGVSVSAVIAILLCILTILVI
VILFVLRKRYQKEVILGKPFREIHEQLVAYDEEGGGEMDTNIYDVSILTSARSDARLGPD
PAPPAMYSVVKKPSACKGDMAVMIEVKKDEADHDRDGIPYDTLHIYGYEGTESLAGSLSS
LESSSSFGSELDYDFLNDWGPRFRTLAQIYGSEVNTSY
NT seq 2277 nt   +upstreamnt  +downstreamnt
atgatgatacgctctgttgggaagcgtgcagtcaggacttttctctggacagcgtttcta
cactttattttcaccggagctgaacatgatgaagatgtgtcaaagtcgtccgtcctgcag
agagagaaacgcgagtggcagtggaacatgttgctagtgtacgaggaaaaacagcctcag
aatccaccggagaaaatcggcaggctgaagaacactttcttcaacaagaacgcggcgttc
cgtctctcgggagacggagcaggagacaccttcagcctgaacgagttcggagaggtgctc
gtgttgaagaagctggatcgggaaactatcagcagctacacactaaaagcacaaatcata
gactctacgaatggaaggaagcttgaggaggacaccgagttcaccatacaggtccaggac
attaacgatcacacacccgtgttctcagggccttacaccgggtttgttaatgaacgagca
gaaagaggaactgtggtgatgaaggtgcgtgcgactgataaagacgacccgagcactccc
aacggcatcgtcacctacaaactgctgaacggaaccagcttcttcaggatttcagataaa
acgggtgaaattttcaccactgttgacacactggaccgtgagactcagagtgagtatacg
ctgatggtgcaggcgtcggacatgcccggattagagggaggacgatcagcgagcactgtg
gtgaccatcagcatacacgacattaatgacaacgtggccatgttctctaaacaaagctac
cactttgttgtgaaggaggatgtgccagtagggttcaagatcggaacgctggacattaaa
gaccgcgacgagaaacagaataaaaaacccatttttactgtagaccattctcataaagac
atctttgatctggagctaaacgaaaataatgatggagttctcacactgaagaagggactc
gactatgagatgaagaagaggtacacttttaccgtgacagttaaagagaatgtcgcccaa
cctccggacaatacaaaccccaggacgagtgcacagatcgacatcaccgttgaagatgtg
gacgagccgccggtcttcaccaaggcagaatacacatttaatgttactgaaggtcagaaa
aatataatcgtgggatcggtttcggcaaaggacccagacaaggacagctacaggatacgg
tacagcataaaggatccttccagtccggtgaacattaacagtgagaccggacagctcact
ctgaagaccgcactggaccgggaaacctatgatgtacacgtgttccatgtcacagcagag
gaagaatctacaaggaagctggactcttatgcgatggtcagaataaacgtcctggacatc
aacgacaacgacccagacctggccgaagggagcgacgtgtacatctgcgagaaggatgag
agcggaacggttatcggtgttattggtgccatcgacaaggatgagaatcctgggaaattt
cgtttctctctcgcaggaaagagttcaaacttctccctttatgacaatctgaataacacg
gccagcgtcattctaactcacggaggtttcagcactcagagatctgtggagaacattctg
gaaatcgagattacagatggaggaactccgccaaggaaaagcatcagacctgttcacgtg
cgagtgtgtgcgtgtaggagcgagagacaaatcgagtactgcgcagcctacagcaagtcg
ggcgtcagtgtgagcgccgtcatcgccatcctgctctgcatcctcaccatcctcgtgatt
gtgattctcttcgtgctgcgtaaacgctatcagaaggaagtcattctcggaaaaccattc
cgtgagattcacgagcagcttgtggcgtatgatgaggaaggaggaggagaaatggacacg
aacatatacgacgtctccatcctgacctcggctcgctcagacgcccggctcggtcccgat
ccagctcctccagccatgtactccgtagtgaagaagccttcagcctgtaaaggggacatg
gccgtgatgatcgaggtgaaaaaggacgaggccgatcacgaccgggacggaattccctac
gacacgctgcacatttacggctacgaggggaccgagtccctcgccggctcgctgagttca
ctcgaatcgtcttcttccttcggatccgagctcgattacgactttctgaacgactggggg
ccgcgattcaggacactcgctcaaatttacggctctgaagtgaatacttcgtactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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