KEGG   Pangasianodon hypophthalmus (striped catfish): 113545998
Entry
113545998         CDS       T05759                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
  KO
K06752  MHC class II antigen
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04145  Phagosome
phyp04514  Cell adhesion molecules
phyp04672  Intestinal immune network for IgA production
phyp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    113545998
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    113545998
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    113545998
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113545998
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phyp04147]
    113545998
Exosome [BR:phyp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113545998
  Exosomal proteins of epithelial cells
   113545998
  Exosomal proteins of breast milk
   113545998
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 Peptidase_C107 Ig_2
Other DBs
NCBI-GeneID: 113545998
NCBI-ProteinID: XP_026801482
Position
Unknown
AA seq 288 aa
MCEVVTDDAVSLQRVIGQCNDTECVSTQHTDFSHLTHFLQSEMMAKLWICLLLELCSMLD
TINGYYNERRLRCLYSSRDLSDMVYTDSYIFNKVEYIWFNSTVGKFQGYTRHGIHNAEYF
NNDTAYIQRDRAAVDDFCKHNAQIYYTAIIDKTVEPQVEVKSVKQSHGSQPAVLMCSAYS
FYPKLIKVTWMRNEKEVKGGQTSTEEMADGDWYYQIHSHLEYMPESGEQISCVVEHASFK
QPMEYKWDPSASAPDKSKIAIGASGLVLGIVLSAAGFIYYKKKSSAPY
NT seq 867 nt   +upstreamnt  +downstreamnt
atgtgtgaagtggtaactgatgacgcagtatctctgcagcgtgtgattggtcagtgtaat
gacactgagtgtgtgagtacacagcacactgacttctctcatctcactcacttccttcag
tcagagatgatggcaaagctgtggatctgtctcctgctggagttatgctccatgttggac
acaataaatggatattacaatgagaggagattacggtgcttatacagctccagagattta
agtgatatggtttataccgattcttacatttttaacaaggtcgagtacatctggtttaac
agtacagtggggaagtttcagggctacactcggcatggcattcataatgcagagtatttt
aacaatgacacagcctacatacaaagagatcgagctgctgtggatgacttctgtaagcac
aatgcacagatctactacacagctataattgataagacagttgagccccaggttgaagtg
aagtcagtgaagcagtcacacggctcccagcctgctgtgttgatgtgcagcgcttacagc
ttttacccaaagctcattaaagtgacctggatgaggaatgagaaagaagttaagggaggt
cagacgtccactgaggagatggctgatggagactggtactatcagatccactcacatctg
gagtacatgcctgaatctggagagcagatctcctgtgtggtggaacacgccagcttcaaa
caacccatggaatataagtgggacccctcggcttctgcacctgataagagtaagattgct
atcggggcttcagggctggtgttggggatcgtgctttcagctgctggattcatctactac
aagaagaaatcctcagctccttactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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