KEGG   Pangasianodon hypophthalmus (striped catfish): 113547676
Entry
113547676         CDS       T05759                                 
Symbol
ino80
Name
(RefSeq) LOW QUALITY PROTEIN: chromatin-remodeling ATPase INO80
  KO
K11665  chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    113547676 (ino80)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phyp03036]
    113547676 (ino80)
Chromosome and associated proteins [BR:phyp03036]
 Eukaryotic type
  Chromatin remodeling factors
   INO80 complex
    113547676 (ino80)
   INO80 complex (yeast)
    113547676 (ino80)
SSDB
Motif
Pfam: SNF2-rel_dom DBINO Helicase_C HDA2-3 ResIII VipE
Other DBs
NCBI-GeneID: 113547676
NCBI-ProteinID: XP_026803932
Position
Unknown
AA seq 1566 aa
MASEQDGVGASTCLKLAKPLHLQHLERSLRLDAFLRHSSAIFNRDISSDDSDDGLGEGPS
LAPSNPHAPVLVVKEEASDSEEGVRSSGGRAGGRGGAECGTLNGALLQEHKADKASLYNF
TKLRKSRKWLKGVLLSDDTTDSDTDSDDSDFSLTREELHDMLRLHKFTRTHQSKFRADRE
LQQYQYYSAGLLSTQDPFYEQQRHTLGPKKKKIKEEKKFKAKLKKMKKKKKRGEEFSSEG
RPYVSKIFAKFSHDAPLPMTKKKHLTVEQLNARRRKVWLTIAKKENPKAFKQKASAKNFV
LTNAKKLAHQCMREVRRAAIQAQKNCKETLPRARRLTKEMLLYWKKYEKVEKEHRKRAEK
EALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMGGKHKGAGGDSAQDEILRKLDESA
AQRQISIGGGVMVNMGHEEYDSEYYKSQALRNAKEAYQIHQARTRQFDEESKDSRSASLH
VAGGCGSGFGESYSLSNPSIQAGEDIPQPTIFNGKLKAYQLKGMNWLANLYEQGINGILA
DEMGLGKTVQSIALLAHLAERDNIWGPFLIISPASTLNNWHQEFTRFVPKFKVLPYWGNP
HDRKVIRKFWSQKTLYTQNAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSTS
VRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAE
NKSAIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILTSCQLTSRQRLLYQALKNKI
SIEDLLQSSMGTAQQAHSTTSSLMNLVMQFRKVCNHPDLFERQETRSPFHMSLKPFIMSK
FLFRHGVLHTCTPGRSKXVSSRSDFTFSPDHCETHTLHLCCSIGDEGSCFSFLRFIDVSP
AEMSNAMLQGTLARWLALYLSFKAAHRLHHRRLWSADEEEEDGGGGRKAWSSASSGSCYL
SNRDLILWPDRTTSFPNTHNSTVLQDLVFTSLRPWTFTHTDVVIHSRRSNTSTLRRCQPT
QPPKFLLTVTPRVTAVPVERYCADRSAEYEWRQVRDGGSLTAKQCFLFGSPELARTWAAR
AHYFHPQSPGGLMALQPRHGWSFIRIPDKESLITDSGKLHTLDLLLTQLKSQGHRVLIYS
QMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGIN
LTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEI
QRMVISGGNFKPDTLKPKEVVSLLLDDEELEKKLRLRQEEKRQLEESSKVKDRKRKREKY
AEKRKKEEDAETKKKKEGVNLVIPYAPSADNSNLSADGEDSFISVDMESAMPSPFSEISL
SSELQPGSLPADESSSDMLVIVDEPLPTNSPASGTGSVSDNMNGVSSLDVSSPGRGRAAR
SRGRPKGSGTGGKCASRKGRGRKSTAGSAAAMAGAMAGAAAASAAAYAAYGYSVSKGIAA
AASGSLQPAIARSSASAAFIPVSTTSPQAKGSSLGSGAQLLPHGSSHVLHAPSKRGKAPS
GHAGGR
NT seq 4701 nt   +upstreamnt  +downstreamnt
atggcctcagagcaggatggcgttggagcctctacctgcctcaagttggccaaaccgctg
cacctgcagcacctggagcgctcgctccgcctcgacgccttcctccgccactcctccgcc
atcttcaaccgagacatatccagtgatgacagcgatgacggtctgggtgaaggcccgtct
ctggccccttcgaaccctcacgccccggtgctggtggtgaaggaggaggcgtctgactct
gaggagggtgtgaggagctcaggaggaagagcaggaggaagaggaggagcggagtgcggt
actctgaatggagctctgcttcaggagcacaaagcggacaaggccagtctgtacaacttc
accaagctgaggaagagcaggaaatggctgaagggtgtgttgctaagcgacgacaccacg
gattcagacacggattcggatgattcggatttttcgctgacccgggaggagctccatgac
atgctgaggctgcacaagtttacccgcacgcaccagagcaagttccgggccgaccgcgag
ctgcagcagtatcagtactacagcgccggtctcctctccacccaggacccgttctacgag
cagcagcgccacacgctggggcccaagaagaagaagattaaagaggagaagaaatttaaa
gccaaattaaagaagatgaaaaagaagaagaaacgaggcgaggagttctccagcgaggga
cggccctacgtcagcaaaatattcgccaagttctcccatgatgcacctctgcccatgacc
aagaagaagcacttaaccgtcgagcagctaaacgcacgcaggagaaaagtctggcttact
atcgccaaaaaggaaaaccccaaagcttttaagcagaaagcctctgcgaagaacttcgtg
ttaaccaatgccaaaaagctggcccaccagtgcatgcgtgaggtgcgtcgagccgcgatc
caggcgcagaagaactgtaaggagacgcttcctcgagctcgacgcctcaccaaggagatg
ctgctgtactggaagaagtacgagaaggtggagaaagaacatcgcaagcgcgctgagaaa
gaggctctagagcagcgcaaactggacgaggagatgagagaggctaagcggcagcagagg
aagctgaacttcctgatcacgcagacggagctgtacgctcacttcatgggcgggaagcac
aaaggcgcgggcggagacagcgctcaggacgagatcctcaggaagctggacgagagcgcc
gcccagaggcagatcagcatcggcgggggggtgatggtcaacatgggccacgaggagtac
gacagtgaatactacaaatctcaggccctgaggaacgccaaagaagcctaccagatccac
caagccagaacgaggcagtttgacgaggaatcgaaggacagccgcagtgcctctctgcac
gtggcgggtgggtgtggctccgggttcggggagagctacagcctgtctaatccctccatc
caggctggagaagacattccccaacccaccatcttcaacggcaagctcaaagcctaccag
ctcaagggcatgaactggctcgctaacctttacgaacagggcatcaatggcatcctggca
gatgagatgggtctgggtaagacggtccagagcatcgccctgctggcccacctggctgag
agagacaacatttggggtcccttcttgatcatctctccggcctccacgctcaacaactgg
caccaggagttcacccgtttcgtgcccaaattcaaggtgttgccgtactgggggaaccct
cacgaccgtaaagtgatcaggaagttctggagccagaaaacgctgtacacgcagaatgcg
cccttccacgtggtgatcaccagttaccagctggtggtgcaggacgtgaagtatttccag
cgggtcaagtggcagtacatggttctggacgaggcgcaggctctgaagagcagcaccagc
gtgcgctggaagatcctgcttcagttccagtgccgaaaccgactgctgctcacaggaaca
cccatccagaacaccatggccgagttgtgggctctgctgcacttcatcatgccgactctg
ttcgactcccacgaggagttcaacgagtggttctccaaagacatagaaagccacgccgag
aacaaatccgccatcgacgagaaccagctctccagactgcacatgatcctgaagcccttc
atgctgcgcaggataaagaaggatgtagagaacgagctctcagacaagatcgagatcttg
acgtcgtgccagctgacgagcagacagaggctcctgtaccaggctctgaagaacaagatc
tccatcgaggacctgctgcagtcgtccatgggcacggcacagcaagcgcacagcaccacc
agcagcctcatgaacctcgtcatgcagttccgaaaggtgtgtaatcacccggacctgttt
gagagacaggagacgcgttccccattccacatgtccctaaaacccttcatcatgtccaag
ttcctgttccgccacggcgtccttcatacctgcaccccgggaaggagcaagtgagtttca
tcacggtctgattttacgttttctcctgatcattgtgaaacacacacactccatctctgc
tgttctataggtgatgaaggcagctgcttctcgtttctgcgcttcattgacgtctctcca
gcagagatgtccaacgccatgctgcagggaactctggccagatggctcgcgctttacctc
tcctttaaagctgctcaccggctccatcaccggcggctgtggagcgcagacgaggaggag
gaggatggtggtggtgggaggaaggcttggagcagcgcgagctctggatcatgttatctc
tctaacagagatctcatcctgtggccagacagaaccacgtcgttccccaacacgcacaac
agcaccgtcctacaggatctggttttcacttctctccgtccgtggactttcacacacaca
gatgtagtgatacacagcagacgctccaacacctccaccctcagacgctgccaacccacc
cagccacccaagttcctgctcaccgttacacccagggtgacagcggttcccgtagagcgt
tactgtgccgaccgcagcgccgagtacgagtggcggcaggtccgtgacggcggcagtttg
accgccaagcagtgcttcctgtttggctcacctgagctggcgcgcacctgggccgcccgc
gctcactacttccaccctcagagcccgggggggttgatggccctgcagccccgacacggc
tggtccttcatcaggataccggacaaggagagcctgatcacggacagcgggaagctccac
actctggacctgctgctgactcagctgaagtctcagggccatcgcgtcctcatttactcc
cagatgacccgcatgatcgacctgctggaggagtacatggtgtaccgaaaacacacatac
atgcgactggacggttcgtccaagatctcggagcgtcgtgacatggtggcggacttccag
agccggacggatatatttgtgtttctcctcagcactagagcagggggtctggggataaat
ctgaccgctgcagacacggtgattttctacgacagtgactggaaccccacggtggatcag
caggccatggaccgagctcacagactgggccagaccaagcaggtcacagtttaccgcctc
atatgtaaaggcacgatagaggagcgaatcctacagcgggccaaggagaagagcgagatt
cagaggatggtgatttcaggagggaatttcaaacccgacaccctgaagcctaaagaggtg
gtcagtctgctgctggacgacgaggagctggagaaaaaactgcgtttaaggcaggaggag
aagaggcagctggaggagagcagcaaggtgaaggaccgtaagaggaagagagaaaaatac
gccgagaagaggaaaaaggaggaggacgcagagacgaagaagaagaaagaaggcgtgaac
ttggtgatcccgtacgccccctcggcggacaactccaacctgtcggcggacggagaggac
tcgttcatcagcgtggacatggagtcggccatgcccagccccttcagcgagatctctctg
agcagcgagctgcagccgggctctctgccagccgatgagagcagcagcgacatgctggtg
atcgtggatgaaccgctgcccaccaactcgcccgcctcaggcaccggctctgtctcggac
aacatgaacggtgtctcttctctagacgtgtcgagtccaggcagaggcagagccgctcgg
agccgagggcgacccaaaggctcgggaaccggcgggaagtgcgcgagcaggaagggtcga
gggaggaagtcgacggccggcagtgcagcagcgatggctggagcgatggcaggggcagcg
gccgcttcggctgcagcgtacgcggcgtacggctacagcgtgtctaaaggtattgctgct
gccgcttctggctccttgcagccggcgattgcgcgatcttcagcctcggcagcgttcatc
cccgtgagcacgacctccccccaggctaagggctcgtctctgggctcgggcgctcagctc
cttccacacggcagctcgcacgtccttcacgctccctccaagagaggcaaagctccaagc
ggccatgctggcggacggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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