KEGG T05364: CHX26

Porphyrobacter sp. HT-58-2: CHX26_02855

Entry

CHX26_02855       CDS       T05364

Name

(GenBank) exodeoxyribonuclease VII large subunit

K03601

exodeoxyribonuclease VII large subunit [EC:3.1.11.6]

Organism

phz Porphyrobacter sp. HT-58-2

Pathway

phz03430

Mismatch repair

Brite

KEGG Orthology (KO) [BR:phz00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CHX26_02855
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phz03400]
    CHX26_02855
Enzymes [BR:phz01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     CHX26_02855
DNA repair and recombination proteins [BR:phz03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     CHX26_02855

SSDB

Motif

Pfam:

Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon Gly_transporter RecJ_OB

Other DBs

NCBI-ProteinID:

AUX68590

UniProt:

A0A2L0GH92

Position

complement(578268..579734)

AA seq 488 aa
MAPPPTSDDNAGLVARERQGDNAQPLTISEISALLKRTVEDRFGYVRLRGELSGVKRAAS
GHFYCALKDEGAVLDGVMWKGNAARLNFRAEDGLEVIATGKLTTYPGRSKYQIVIDSLEL
AGEGALLALLEKTRARLAAEGLFDAGRKRALPFLPRVIGVVTSPTGAVIRDILHRLADRF
PSHVLVWPVLVQGNGAAEQVAAAVRGFSAIAPGGPVPRPDVVIVARGGGSIEDLWSFNEE
VVVRAIAECTIPVISAVGHETDTTLADFAADRRAPTPTAAAEMAVPVRADLAFTLTDLAA
RQRRAVYRPVELGRERLAARARLLPRPENLLQPQAQRLDDLSERLRRALGDRSAKGRERL
AGVAARLSPSLLTRSAAEAQRRLDRARLTPSLVERPLRQGSDRLAALTRVMSQLHPEKPL
ERGYAIIRSSEGKALTTRAEAVDEALLTVQFRDGTLTVAPGETPPPPSPRPAPKPRPAAP
PRQDDLFG

NT seq 1467 nt +upstreamnt +downstreamnt
atggcccctccgccaaccagtgatgacaatgccgggctggtagcgcgcgaaaggcagggc
gacaacgcccagccgctgaccatcagcgagatttccgcgctgttgaagcgcacggtcgag
gaccgcttcggctacgtgcggctgcgcggggaattgtccggcgtgaagcgggcggcttcg
gggcatttctattgcgccttgaaagacgaaggcgcggtgctcgacggggtgatgtggaag
ggcaacgccgcacgcctcaatttccgcgccgaagatggcctggaggtgatcgccaccggc
aagctgacgacctatccggggcgctcgaaatatcagatcgtgatcgacagcctcgaactg
gcgggcgagggcgcgctgctggcgctgctggaaaagacccgcgcccggctggccgccgag
gggctgttcgatgcgggccgcaagcgcgccttgccgttcctgccgcgcgtgatcggcgtc
gtcacctcgcccaccggcgcggtgatccgcgatattctccaccggctggcggaccgcttt
ccgtcgcatgtgctggtctggccggtgctggtgcagggcaatggcgcagccgagcaggtg
gcggccgccgtgcgcgggttctccgcgattgcccccggaggccccgtcccacgccccgac
gtggtgatcgtggcgcgtgggggcgggtcgatcgaggacctatggagcttcaacgaagag
gtcgtcgtccgcgccatcgccgaatgcaccatccccgtgatcagcgcggtgggccatgag
accgataccacgctggccgatttcgccgctgatcgccgcgcgcccacgcccacggctgcc
gccgaaatggcggtgccggtgcgcgccgaccttgctttcacgctcaccgatctcgccgcc
cgccagcgccgcgcggtctaccgtccagtcgagctggggcgcgagcgcctcgccgcccgc
gcgcggctgctgccgcgccccgaaaacctgctgcaaccccaggcccagcggctcgatgat
ctgtccgaacgcctgcgccgcgctctcggggatcgctcggccaaggggcgcgagcggctg
gcaggcgtcgccgcgcggctctcgcccagccttttgacgcgctccgccgccgaggcgcag
cggcggctcgaccgggcgcggctcaccccttcgctggtcgagcggcccttgcgtcagggc
agcgaccggctcgccgcgctgacgcgggtgatgagccagctccaccccgaaaagccgctc
gaacgcggctatgcgatcatccgatcgtccgaaggcaaggcgctgaccacccgcgccgag
gcggtggacgaggcgctgctcacggtacagttccgcgacggcacactgaccgtcgcaccg
ggcgagaccccgcccccaccctcgccccgtccggcacccaaaccgcgacctgctgcgccg
ccgcgccaagatgatttgttcggatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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