KEGG   Paenibacillus ihbetae: BBD41_24820
Entry
BBD41_24820       CDS       T05154                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
pib  Paenibacillus ihbetae
Brite
KEGG Orthology (KO) [BR:pib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pib03016]
    BBD41_24820
Enzymes [BR:pib01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     BBD41_24820
Transfer RNA biogenesis [BR:pib03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BBD41_24820
 Prokaryotic type
    BBD41_24820
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: ANY75535
UniProt: A0A1B2E6C6
Position
5568523..5569437
AA seq 304 aa
MTELEGILAVHKPAGWTSHDVVAKVRGIVRMKRIGHTGTLDPEVTGVLPLCLGRATRVVE
YMQELPKEYEAVLRLGYATDTEDVTGTVIEEADSVQVTREEAEQALNSFVGEISQVPPMY
SAVKINGKRLYELAREGKTVERKSRTVTIHEIEMTGFDASGAYPEISFRVLCSKGTYIRT
LCVDIGRKLGVPSVMVRLVRTISAGIPAADCLTLDTIEQLMKEGQLQNKLIPVDRAVSHL
PAHTVSDEKAEAALQGQRLSARAVEPRVESDEPIRLYDSQERFLGIYKRQAESGAIVPVK
VFSR
NT seq 915 nt   +upstreamnt  +downstreamnt
atgacagaactggaaggtatcttggctgtgcataagcccgccggctggacatcgcatgat
gtggtagccaaagtaagggggattgtccgcatgaaacggattggccatacgggtacgctg
gatcccgaggttacgggagtgctgccgctgtgtttgggcagagcgacgcgagtcgtggag
tatatgcaggagctgccgaaggaatacgaggctgttctgcgacttggatatgctacggat
acggaggatgtcacaggtacggttattgaagaggcagacagcgtgcaggtgacgagggag
gaagcggagcaagcgctgaattcctttgtcggtgagatttcccaggttcccccaatgtat
tccgctgtcaagataaacggcaagcggctgtatgagcttgcgcgtgaagggaagaccgtg
gaacgcaaaagccggaccgttaccattcatgagattgagatgaccggctttgacgccagc
ggcgcctatcccgaaatatcgtttcgggtgctgtgctccaaaggtacatatatccgcaca
ttgtgcgtggatatcggccgcaagctcggcgttccttccgtcatggttcggcttgtacgc
acgatctcggccggcattccggcagccgattgcctgactcttgacaccatcgaacagctt
atgaaggaaggacagcttcagaataagctgattccggtcgaccgggcggtctcccatctt
cctgctcataccgtatcggatgagaaggctgaagctgctctgcaaggacagcgcttgtcc
gccagagccgtggaaccccgggtcgaaagcgacgagccgatcaggctctatgacagccaa
gaaagatttcttggaatctacaaacggcaggccgaatcaggggcgatcgtgccggtgaag
gtcttctcaagataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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