KEGG   Scheffersomyces stipitis: PICST_30161
Entry
PICST_30161       CDS       T01023                                 
Name
(RefSeq) predicted protein
  KO
K10771  AP endonuclease 1 [EC:3.1.11.2]
Organism
pic  Scheffersomyces stipitis
Pathway
pic03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PICST_30161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pic03400]
    PICST_30161
Enzymes [BR:pic01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     PICST_30161
DNA repair and recombination proteins [BR:pic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     PICST_30161
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-GeneID: 4837264
NCBI-ProteinID: XP_001382630
JGI: 30161
UniProt: A3LQ27
Position
2:2104136..2105467
AA seq 379 aa
MPPKVKTEVAKAVKETVKKTVRAKKVKKVEFKYERSTTSKFKFGAHVGASGGVSNSVINA
RNLGANSFALFLKSPRKWVSPPISAEEIDKFKSLCEEHGYDPRTDVLPHGSYFINLANPD
PEKEEKAFDGFLDDLHRCEQLNIGLYNFHPGSSLDGDHREALERLAKNINRAIKETSFVK
IVIENMAGHGNLIGSNLQDIRDVIDIVEDKSRVGVCVDTCHTFAAGYDISTEEKFEAFWK
EFDNIVGAEFLSAIHLNDSKAPLGANRDLHQFLGQGFLGLEAFRVVANSPRLHNIPIILE
TPVGNDDSYYGEEIKLLELLEDKTIDDTEFVEKKEKLSKLGAKERSEHEKKFETKKAKTA
KKTAGDDIASLVTKRPKRK
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgcctcctaaagttaaaactgaggtagccaaagctgtcaaggaaactgtcaaaaagacg
gtcagagccaaaaaggttaagaaggtcgagttcaagtatgaaagactgactacgagcaaa
ttcaaatttggagctcacgtaggtgcatctggtggagtttcaaattccgtcatcaatgcc
agaaaccttggtgctaacagttttgccttgtttttgaagtctcctaggaaatgggtgagt
ccccccatctctgctgaagaaattgacaaattcaagctgttgtgcgaagaacacggatat
gatcccagaaccgacgttttacctcatggatcgtatttcattaacttagccaatccagac
cctgaaaaggaggaaaaagcgtttgacggatttctagatgatttgcacagatgtgaacaa
ttgaacattggattatataactttcatccaggctcgagtttagacggggaccatagggaa
gctcttgagaggttggccaaaaacatcaacagggctattaaagaaacaagctttgtcaaa
atcgtgattgaaaatatggctggccacggtaacttgatcggatccaatctacaagatatc
agagacgtcatagacatcgtagaggacaagctgagagtcggagtttgcgtcgacacttgc
cacacatttgctgctgggtacgatatttcgactgaggagaagtttgaagcgttctggaag
gagtttgacaacattgtgggtgccgaattcttgagtgccatccatttgaatgactccaaa
gctcctttgggtgccaacagagatttacaccaattcttgggacaaggatttttgggcttg
gaagcattcagagtcgtggctaactcgcccagattgcacaatattcccatcatcttggaa
acccccgtaggtaacgacgatagttactatggagaagagattaaactcttggaactatta
gaggataaaaccattgacgacacggagtttgtagagaagaaagaaaagctctcgaagttg
ggagcaaaagagagatccgagcatgagaagaagttcgagaccaagaaggctaagacggct
aagaagactgctggtgatgatatcgcttcgttggttacaaagagacccaaaaggaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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