KEGG   Scheffersomyces stipitis: PICST_32479
Entry
PICST_32479       CDS       T01023                                 
Name
(RefSeq) mediator subunit of RNA polymerase II
  KO
K15132  mediator of RNA polymerase II transcription subunit 11, fungi type
Organism
pic  Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:pic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pic03021]
    PICST_32479
Transcription machinery [BR:pic03021]
 Eukaryotic type
  RNA polymerase II system
   Mediator complex
    Head
     PICST_32479
SSDB
Motif
Pfam: Med11 Tim54
Other DBs
NCBI-GeneID: 4839263
NCBI-ProteinID: XP_001385005
JGI: 32479
UniProt: A3LWI0
Position
5:1610907..1611617
AA seq 236 aa
MSETFIQERLDSLYEIDCKIVSLLDNISTLFQTYSSSDGDVKESFASQTEEIYSILSKVA
IDLRKEVKVMDDNIGVYDKNKDGVMILPIGVDQKNTTLGRKKLNEELKELEGLLPPVSKS
NEEDISMADAEQSVEIEKNAEEDKTQVKKEAVQESITEPEKSNQSTNEETKETQPDQIES
KDDIKQETPFNEINIPKESTSEPELGLGADIDIDMDNNDNNNDDNSNVDDLFEDIL
NT seq 711 nt   +upstreamnt  +downstreamnt
atgtcagaaacgttcatccaggaaagactcgattctctctacgagatcgactgcaagatt
gtctccttgctagacaacatatctacgctcttccagacctatagcagcagcgatggcgat
gtcaaggagtcgtttgcgctgcagacagaagaaatctacagcattttgagcaaagtggca
attgatcttcgtaaggaagtcaaggttatggacgataacattggagtctacgacaagaac
aaagacggagtcatgatattgcccattggagtagaccagaagaacaccacacttggaagg
aaaaagcttaacgaggaattgaaggaattagaaggcttattgccacccgtcagcaagagc
aacgaagaggatatcagtatggcagatgctgaacaatcagtagaaatagaaaagaatgct
gaagaagataagacacaagtaaagaaagaagctgttcaagagtcgataacagaaccagaa
aaaagcaatcaatcaacaaatgaagaaactaaagaaactcaacccgaccaaatagaatca
aaggatgacatcaaacaagaaacaccattcaatgaaatcaacattccaaaggagtcgact
tcggaaccagaacttggccttggcgccgatattgacatcgacatggacaacaatgacaat
aataacgatgataatagcaatgtagatgatctttttgaagatatactatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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