KEGG   Scheffersomyces stipitis: PICST_42410
Entry
PICST_42410       CDS       T01023                                 
Name
(RefSeq) ELongator protein
  KO
K07739  elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
Organism
pic  Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:pic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pic03016]
    PICST_42410
Enzymes [BR:pic01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.311  tRNA carboxymethyluridine synthase
     PICST_42410
Transfer RNA biogenesis [BR:pic03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    PICST_42410
SSDB
Motif
Pfam: Radical_SAM_C Radical_SAM Acetyltransf_10 Acetyltransf_1 Acetyltransf_7
Other DBs
NCBI-GeneID: 4837015
NCBI-ProteinID: XP_001382617
JGI: 42410
UniProt: A3LPZ7
Position
2:2020258..2021934
AA seq 558 aa
MPSVQSTKGGKQKLAPEKERFLQCCGDISLELVASLKNSKDINLNGLIIRYAKKYKLKQQ
PRLTDIISSIPDQYKKYLIPKLKAKPVRTASGIAVVAVMCKPHRCPHIAYTGNICVYCPG
GPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQARGRLEQLRSLGHSIDKVEYIIMGGTF
MSLPIDYREGFITQLHNALTGYNGKDIDEAIKYSQQSQTKCVGITIETRPDYCTETHLSD
MLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFAVAKDAGYKVVSHMMPDLPNVGM
ERDLEQFKEYFENPEFRTDGLKLYPTLVIRGTGLYELWKKGLYKSYNANALIDLVARIMA
MVPPWTRIYRVQRDIPMPLVTSGVENGNLRELALARMKDFGTTCRDVRTREVGIQEVHHK
VVPDHVELIRRDYYANGGWETFLSYEDPKKDILIGLLRLRKASKKYTYRKEFTNQPTSII
RELHVYGSVVPLHSRDPRKFQHQGFGTLLMEEAARIAKEEHGSEKISVISGVGVRNYYAK
LGYHLDGPYMSKWLNDEE
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgccttctgttcagagcaccaagggcggaaaacagaagttggctcctgaaaaggagcga
tttttgcaatgttgcggagacatttcgctcgagcttgtagcttccctcaagaactccaaa
gacatcaacttgaacggcttgatcatcaggtatgcgaaaaagtacaagttgaagcagcag
cccagactaacggatatcatctcgtccatcccagaccagtacaagaagtacttaattcca
aagctcaaggccaaaccggtccgtaccgcatctggtattgcggttgtagcagtcatgtgt
aaacctcacagatgtccccatatagcctacacgggaaacatctgtgtatattgtccaggg
gggccagattcagactttgaatactcgacccagtcatataccgggtatgagccgacttca
atgagagccattcgggctagatatgatccttacgaacaggctcgaggcagactagagcag
ttgagactgttgggccattccatagacaaagttgagtacattatcatgggtggaacattc
atgtcacttcccatcgattacagagaaggcttcatcacccagttacacaacgcattaaca
ggttataacggtaaggacattgacgaagccatcaaatattcccaacaatcacagactaag
tgtgtgggaataaccattgaaactagacccgattactgtactgaaacccatttgagcgac
atgttgaagtacggatgtaccagattggaaatcggggtacagtcggtatatgaggatgta
gcaagagacacgaatagaggacatacggttaaggctgtctgtgaaacctttgctgtagcc
aaagatgctgggtacaaggtggtgagtcatatgatgcctgacttgcccaatgtaggcatg
gaaagagacttggaacaatttaaggaatactttgagaatcccgagttcagaactgacggc
ttgaagttgtaccccacattggtcattagaggcactggattgtacgagttgtggaagaaa
gggttatataagtcatacaatgcgaatgccttgatagacttggtggctcgtatcatggcc
atggtacctccatggacacgtatctatcgtgtgcaaagagatatccctatgccgttagtc
acgtcgggtgtagaaaacggaaacttgagagaattggctcttgccagaatgaaagacttt
ggcaccacctgtagagacgtacgtacaagagaagtcggaatccaagaagttcatcacaaa
gttgtaccagaccacgtggaattgattagaagagattactatgccaatggaggctgggaa
acttttttgtcgtacgaagacccaaagaaggatattttgattggcttgttgagattgcgt
aaggcttctaagaagtacacatacagaaaggaattcaccaaccaacctacctctatcatc
agagaattgcatgtctacggttctgttgtgcccttgcactccagagaccctagaaagttc
cagcatcaagggtttggtaccttgttaatggaagaagctgccagaatcgccaaggaagaa
catggttctgaaaagatctcggtcatttcgggtgtaggtgtaagaaactactacgcaaaa
cttggctaccatttggatggtccatatatgtctaaatggcttaacgacgaggaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system