KEGG   Scheffersomyces stipitis: PICST_80838
Entry
PICST_80838       CDS       T01023                                 
Name
(RefSeq) predicted protein
  KO
K12385  Niemann-Pick C1 protein
Organism
pic  Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03265 Virion - Ebolavirus and Lyssavirus
    PICST_80838
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pic02000]
    PICST_80838
Transporters [BR:pic02000]
 Solute carrier family (SLC)
  SLC65: NPC-type cholesterol transporter
   PICST_80838
SSDB
Motif
Pfam: NPC1_N Patched Sterol-sensing ACR_tran
Other DBs
NCBI-GeneID: 4851495
NCBI-ProteinID: XP_001388008
JGI: 80838
UniProt: A3GGU6
Position
1:complement(1979897..1984121)
AA seq 1268 aa
MKLTILSLLLWTLSLCSATIHKSGYCAMYDNCGKKSVFGSSLPCVANVKAVEPSAKTAQL
LHQICGDDFDTSKVCCSEDQVVNMESNLKRVDPIISSCPACRKNFYDFFCKFTCSPDQST
FLNITKTAIAADTKNEIVAELSQFVDPGTAKDFYKSCANVKFSATNGYAMDLIGGGAKNY
SQFLKFLGDEKPLLGGSPFQINYKYELSEAESDSGLKLRQDNIFACDDETYRCACPDCSK
SCPKLPRFKDFRKRCTVGKIPCFTFSIVIIWISLIILLGGYHVYLAKLKRSRGEDDFDDF
DVTLSPLSYVTVKKPMSSFSNWHLRLIEKIENTFASVGYFCSSYPGLVISFNLVLTLILS
SGLFWLQFETDPVKLWVSPQEPALKNMQYFESSFGEWFRIEQIIVSNKNDSEPILNWNNI
RWWFEKERQLYSLNENVSLSDICFKPLGETCGIESFTQYFYGDINQLTEDNWRAKLKSCT
DSPVNCLPSFQQPLKKNILFDNDDIFQAKAFTVTLLVNSNSKDQTYTESASAYEHSLQKW
AQNLEKENPQLNIAFSTEVSLTEELNKSTNTDIRIIVISYLCMFIYASLALGGKLPNRSL
SSLVKTRFALGLSGIIIILLSVTSSLGLFSFLRLKSTLIIAEVIPFLVLAIGIDNIFLIV
HELHVVSETLYDMSIELRIAQALRNIGPSCLISAVLQVSMFFLATNVDMPAVKNFAYYSA
VAVLINFLLQMTMFISLLALDQHRLENNRLDCFPWITIEDQHNIHLPEGDPNEEIEHVEY
NFSSLITKYYAPYIMSKTNKPKLLTLFVLWFGISLSLLPNINFGLDQRIALPKDSYLINY
FDSVYKYLNVGPPTFFVVKDLDVTERENQQMVCGRFSACDTYSLANILEKEYKRGFKSTI
SEPASNWLDDFFTWLNPDLDQCCRFKKTSVFGEPEFCAPHAPDRQCQTCYENHDPPYDSS
MKGFPTDKDFMFYFNHWIEEPSDPCPLGGKAPYSSSISRNESKVISSYFRTSHSPLRSQG
DFINAYKNSLRIVDEIKKFMPDLDVFAHSPFYVFFVQYERIVELTFTILGSALLIIWGIS
ILLLGSFRTATVMMVTIVSILINIGGVLSLWDISLNAVSLVNLVICAGLAVEFTVHITRA
YTNCNDIYNHANVKLLKAYHSLCTVGGSVLGGITLTKIIGMFVLAFTRSKIFEVYYFRMW
FSLIFIAAVHALCLLPILLSYFGDDHKTTSRISDESQITGEISNEANGAFRRYSDYIEEV
ENVEESES
NT seq 3807 nt   +upstreamnt  +downstreamnt
atgaagctcacgatattgctgcttctcctatggacgttgctgttatgtctggccaccatc
cacaagagtggctattgtgccatgtacgacaattgcggaaagaagtctgtgttcggtagt
tcgcttccttgcgtggccaacgtcaaagcagtagaaccgtctgcgaaaactgctcaattg
ctccaccagatctgcggggatgactttgacacttccaaagtgtgctgctcagaagaccag
gtggtcaacatggaatccaacttgaaacgagtggatcccatcatctcatcctgtccagcc
tgtagaaagaacttctacgacttcttttgcaagttcacctgttcgcccgaccagtccact
tttttgaacatcaccaaaactgcaatcgctgccgataccaaaaatgagattgtcgccgaa
ctttcacaatttgtagatcctggaacagccaaagacttctacaagtcatgcgccaacgta
aagttctcggcaaccaacggctatgccatggacctaataggcggaggagctaagaactac
ctgcaatttctcaagttcttgggcgatgagaaaccgcttttgggtggttctccgttccag
atcaactacaagtatgagttatcagaagccgagtctgacctgggattgaaattgagacag
gataacatctttgcttgtgatgacgaaacttatcgctgtgcctgtcctgattgctcaaag
tcttgcccgaagcttcctcgattcaaggacttcagaaagagatgcacggtaggcaagatc
ccctgcttcacgttttcgatcgtaatcatctggatctctttaataatcttacttggagga
tatcacgtctatttggccaagttgaaacgttccagaggggaggacgacttcgacgacttt
gatgttactttgagtccacttagctacgtcaccgtcaagaagccaatgtcgagtttcagc
aattggcatctcagattgatcgaaaagatcgagaacacatttgccagcgtcggatatttc
tgctcttcttatccaggtttagtaatctctttcaacttggtattgacgctaatattatcc
tctggactattctggctccagtttgaaactgatcccgtcaagctctgggtctctccacag
gagccagctctcaagaacatgcaatactttgaatcaagctttggagaatggttcagaatc
gaacagataatcgtcagcaataagaatgactccgaacccattttgaactggaataatata
cgttggtggtttgaaaaggaacgccagctctattccttgaacgaaaacgtgtcgttgtct
gatatctgcttcaaaccactcggcgaaacttgtggcatagaatcgttcacacagtacttc
tacggagatatcaatcagcttactgaagataactggagagccaaattgaagagctgcaca
gactctccagtcaactgcttgccttcattccaacagccgttgaaaaagaacatcctattt
gacaatgatgacatctttcaagcgaaggcattcactgtaacattattggttaatagcaac
ctgaaagatcaaacttatacagagtctgctagcgcctacgagcatctgcttcagaaatgg
gctcaaaacttagagaaagagaatccacagctaaacatcgctttcagtacagaagtatct
ctcacagaagagttgaacaagtctacaaacaccgatatcagaattatcgtcatttcctat
ttgtgtatgttcatctatgcctctttggctttgggaggaaagttgcctaacagaagcctt
tctagtcttgtcaagaccagatttgcattgggattatctggtataattatcatcttgcta
tccgtgacatcttcgctaggtttgttttctttcttgagattgaaatcaaccttaatcatt
gccgaagtaattcccttcttggttttggcaattggtatagacaacatcttcttgattgtt
cacgaattgcatgtagtaagcgagaccttatacgatatgtccatagagttgagaatcgcc
caggctctcagaaacattggtccttcgtgccttataagtgccgttctacaggtgtccatg
tttttcttagccaccaatgtagatatgcctgctgtaaagaactttgcttattacagtgca
gtggcagtattgatcaacttcttgctacaaatgactatgttcatatcattgctagctctt
gatcagcatagattggagaacaaccgtttggattgctttccttggatcacaatcgaggac
cagcataacattcatttacctgaaggtgaccccaacgaagaaatcgaacatgtggagtat
aacttctcgagcttaattaccaagtattatgctccatacatcatgtctaagaccaacaaa
ccaaaacttttgacattgtttgtactttggtttggaatttctttgagtttgcttccaaac
atcaactttggattagatcaaagaatagcgcttcccaaggattcatacttgatcaactac
tttgactcggtgtacaagtatttaaacgtaggacctcctaccttttttgtggtcaaggac
cttgacgtaactgagagggaaaatcagcagatggtgtgtggtcgtttctctgcttgcgac
acttattcgttagccaatattcttgaaaaggaatacaagcggggattcaagtctaccata
agtgaacctgctagcaactggctagacgatttttttacctggttgaatccagatttggac
caatgctgtaggtttaaaaagacttccgtattcggggaaccagagttctgtgcccctcat
gctcctgatcgacaatgtcaaacctgttacgagaatcatgatccaccatatgacagctct
atgaagggtttccccactgacaaggactttatgttctactttaaccattggatagaagaa
cccagtgatccttgtccacttggcggaaaggccccatattcatctagtatatctcgtaac
gaaagcaaagtgatttctagttacttcagaacttcacattcgcctttgagatctcaggga
gacttcattaatgcctacaagaactcactccgaattgtggatgagatcaagaagttcatg
cctgacttggacgtctttgcccattcgccattctatgtcttctttgtgcaatatgagaga
attgtagagcttaccttcaccatcttgggactggcattgcttatcatatggggaattagc
attctcttgttaggctcgtttagaacagccacggtgatgatggtgactatagtatcgatt
ttgatcaacattggcggtgttttgtcgttatgggacatctcattgaacgctgttagtttg
gtgaatttggtgatatgtgctggtctagctgttgagttcacggttcatatcacaagagca
tacactaattgcaatgatatctacaaccacgcaaatgtaaagttgctcaaagcttaccat
tccttgtgcactgtaggaggttcagttcttgggggaatcacgctcactaagatcatcggc
atgtttgtattggcatttactaggtccaagatctttgaggtgtactacttccggatgtgg
ttctcgttgattttcattgctgccgtgcatgctttgtgtcttttgcctattctactcagc
tactttggcgatgatcacaagactacgctgaggatttctgatgaatcccagattaccggg
gagattagcaacgaggccaacggagcgttccgtcggtactccgactacatcgaagaggta
gagaatgtggaagaatcggagagttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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