KEGG   Scheffersomyces stipitis: PICST_80864
Entry
PICST_80864       CDS       T01023                                 
Symbol
POL30
Name
(RefSeq) DNA polymerase delta processivity factor (proliferating cell nuclear antigen)
  KO
K04802  proliferating cell nuclear antigen
Organism
pic  Scheffersomyces stipitis
Pathway
pic03030  DNA replication
pic03410  Base excision repair
pic03420  Nucleotide excision repair
pic03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PICST_80864 (POL30)
   03410 Base excision repair
    PICST_80864 (POL30)
   03420 Nucleotide excision repair
    PICST_80864 (POL30)
   03430 Mismatch repair
    PICST_80864 (POL30)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pic03032]
    PICST_80864 (POL30)
   03400 DNA repair and recombination proteins [BR:pic03400]
    PICST_80864 (POL30)
DNA replication proteins [BR:pic03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PICST_80864 (POL30)
DNA repair and recombination proteins [BR:pic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PICST_80864 (POL30)
   MMR (mismatch excision repair)
    Other MMR factors
     PICST_80864 (POL30)
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    PICST_80864 (POL30)
SSDB
Motif
Pfam: PCNA_N PCNA_C Hus1 Rad9 DUF229
Other DBs
NCBI-GeneID: 4851293
NCBI-ProteinID: XP_001387918
JGI: 80864
UniProt: A3GG94
Position
1:complement(1429777..1430594)
AA seq 259 aa
MLEGKFDESTLLKKIVDAIKDCVKLCNFNCTEHGITVQAVDDSRVLLVSLLVGQTAFSEY
RCDRDITLGIDLDSFSKIIKCGNNEDYLTLLAEDSPDAVMTIFEDKKKERVSEYSLKLMN
IDSEFLKIDDMEYDTVINMPSTEFAKIVRDLKNMSESLNIIVTKDSVKFTSEGESGSGSV
VLKPYTDMDKPEESVTVHLDQPVDLTFGLKYLNDIIKATSLSGTITIKLADKTPALFEYK
LDVGGYLRFYLAPKFDEDE
NT seq 780 nt   +upstreamnt  +downstreamnt
atgcttgaaggtaaattcgacgagtccactcttttgaagaagatcgtggacgccatcaaa
gactgtgtcaagttatgtaacttcaactgcacagaacatggcataactgtccaggctgtg
gacgactctagagtgcttttggtttcgttgttggtgggccagactgccttctctgagtac
agatgtgacagagacatcacattgggaattgacttggactcgttttccaagatcatcaag
tgtggtaacaacgaagattacttgacccttttggccgaggactctcccgatgccgtgatg
accatattcgaagacaagaagaaggaaagagtcagtgaatactcgttgaagttgatgaac
atcgactcggagttcttgaagatcgacgacatggaatacgacaccgtcataaatatgcca
tcgaccgaatttgccaagatcgtcagagacttgaagaacatgtcggagtcgctcaacatc
attgtcaccaaggactccgtcaagttcacctctgagggtgaatctggatctggatctgtc
gtgttaaagccttacacagacatggacaagcctgaagagagtgtcactgtccacttggac
cagccagtagacttgacgttcggtttgaagtacttgaacgatatcatcaaggctacctcg
ttgtccggaaccatcaccatcaagttggctgacaagacccccgccttgttcgaatataag
ttggatgttggagggtacttgagattctacttggctcctaagtttgatgaggacgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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