KEGG   Phytophthora infestans: PITG_00036
Entry
PITG_00036        CDS       T01333                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6
  KO
K14557  U3 small nucleolar RNA-associated protein 6
Organism
pif  Phytophthora infestans
Pathway
pif03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pif00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PITG_00036
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pif03009]
    PITG_00036
Ribosome biogenesis [BR:pif03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    PITG_00036
SSDB
Motif
Pfam: U3_assoc_6 TPR_14 NRDE-2 Suf DUF2594
Other DBs
NCBI-GeneID: 9476539
NCBI-ProteinID: XP_002908671
UniProt: D0MSQ1
AA seq 671 aa
MADKVQITMEKMVPELEDLQARKIFSADEIRQIVDKRRGFEYSLQRVPLRKIDAMRYIEY
ELKLDALRAARKERLGLVKVSLGDTAGTKRVHNIFDRVLFKHRGSVELWLQYVAFCKREG
SSRVLSAVFSRALQSHPRSAELWIEAASYEFGVNLNVDSARVLMQRAIRLNKHNQKLWLE
YFRLELLYVQKLAMRRQVLRLDEEVPKPVDDDGSTALIDELPEEKDAKEEISEQMAAKMN
ARKLVLQGAIAKIVYTNAIAAIPDDVAFRLKFVEIRDLFGSLTAAELSDFIIQDCLETFP
KSEKVHATKALRPLLTVEDSAASHSGESSEVDSADMSEAERQAELLVVQNFETSITQLDS
VSMKEFFAEWMVARLASSSQTAFLLEYARAKLKEFAFSETCASSPSLAIKYVDLTHRTDG
TNDAFMVVRKICDECQPQSSEMWLLQSQLLLHSDYEEETTSRSPSSKRRRTSRSSYSKTV
NSNPLAAAVAVLKTALTKIATEDYDAQFAVHSRLLQLLIGIAEAASVIEKAFKNALGAQK
RGSSHWSDLRQQYVTWTASATSQRSLEQTRALYTKFMVDEQFLPSSETYSFLLLCVDIET
SATSVDVPQVRKLFEKLVELFGSTHEDVWVQYVRCLSERLGLFADATRVQQRALRVWKES
TALMQYAFAGL
NT seq 2016 nt   +upstreamnt  +downstreamnt
atggcggacaaggtgcagatcacgatggagaagatggtccccgagctggaggacttgcag
gctcgcaaaatcttttcagcggacgagatccgtcagatcgtggataagcgtcgaggcttc
gagtactcgctgcagcgcgtgccactgcggaaaatcgacgccatgcgctacatcgagtac
gaactaaagctggacgcgctacgagccgcacgaaaggagcgtttgggtctcgtcaaggtc
tcgctcggcgatactgcgggcaccaagcgcgtgcacaacatcttcgaccgcgtgctgttc
aagcaccgtggcagcgtcgagctctggctgcaatatgtggcgttctgcaagcgagaagga
agcagtcgagtgttgtccgctgtgttctccagagcgctgcagtcgcacccacgcagcgct
gagctctggatcgaagccgcgtcctatgaattcggcgtcaacctcaacgtggactcggcg
cgtgtgctcatgcagcgtgcgattcgtctcaacaaacataaccagaagctgtggctggaa
tacttccgtctggagctgctgtacgtgcagaagttggcgatgcggcgtcaagtgctgcgt
ctggacgaggaagtaccgaagcctgtggatgacgatggatccaccgcgctgattgacgag
cttccggaagaaaaagacgctaaagaggagatttcggaacagatggcagccaagatgaac
gctagaaagctcgttctgcagggtgccattgcgaagattgtgtacacgaacgccattgcg
gcgattccggacgacgtggcgttccgactaaagtttgtggagattcgtgaccttttcggc
tcactcacagctgcggaactgtcagactttatcatacaggactgcttggagactttcccg
aagagcgaaaaggtccacgctactaaggcgctgcgtcctcttctgacagtggaggacagt
gccgcttctcactctggagagtcttcggaggtggatagtgctgatatgtccgaggctgag
cgtcaagctgagctgttggtcgtgcagaacttcgagacaagtatcacgcagctggactcg
gtctccatgaaggaatttttcgccgagtggatggtcgctcgtctggcctcttccagtcaa
acagccttcttgcttgagtatgcgcgcgccaagctgaaagagtttgctttctcggagacg
tgtgcttcatcgccgtctctcgctatcaagtatgtcgatctgactcaccgcacggacggt
acgaatgacgcgtttatggtcgtgcggaagatctgcgacgagtgtcagccacagtcgtcc
gagatgtggctgctgcagtctcagctcctactccactcggattacgaagaagagaccaca
agtcgatcgccttctagtaagcgacgtcgcacctcgcgcagctcgtattcgaagaccgtt
aacagcaaccccttggctgctgccgttgcggtactgaagacagctttgaccaagattgct
acagaggattacgacgcacagtttgctgttcacagtcgcctcctccagctgcttattggc
attgcagaggctgcaagcgtcatcgagaaggcatttaaaaacgcacttggcgctcagaaa
cgtggctcgtcacactggagtgatctacgtcagcagtacgtgacttggactgctagcgca
acttctcaacgctcgctggaacagactcgtgccttgtacaccaagttcatggtggacgag
cagttcctgccttcctccgagacatactcgttcctgttgctgtgcgtggacatcgagact
tctgcgacgtcagtggatgtgccgcaggtgcgaaagctgttcgagaaactcgtggagctg
ttcggctcgacccacgaggatgtctgggtgcagtatgtgcgctgtctgtctgagcgtctg
gggcttttcgccgacgccacgcgcgtgcaacagcgagcactgcgcgtgtggaaggaatct
acggcactcatgcagtacgccttcgcgggcctgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (37)   

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