KEGG   Phytophthora infestans: PITG_09278
Entry
PITG_09278        CDS       T01333                                 
Name
(RefSeq) hypothetical protein
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
pif  Phytophthora infestans
Pathway
pif03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pif00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PITG_09278
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pif03019]
    PITG_09278
Enzymes [BR:pif01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     PITG_09278
Messenger RNA biogenesis [BR:pif03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     PITG_09278
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 9461757
NCBI-ProteinID: XP_002903563
UniProt: D0NBB0
AA seq 456 aa
MKRFLLTPVAVDPTCGPCGAYVTEPLAPFRRHALVQYLRTVLPDALALDCKVDNADDEDV
VRNPWRRRVRIVAARCRRQRRALVLADEQLADDEIRERNLSLIGFTAVLDVIVAARKPIV
GHNMLLDLMQCYEKFHGPLPGRCSEFQRELHTWLGAGGGVFDTKTLVDYAMQKVDSFATH
LAHTALENCYEVLSKHPFYGPEVQCVRSVDTARDEQVGASQPPLQAHQAGYDAFMTGFVF
LRVCSGLGVSNECIAALGKTSQCLESSSKRSDALENLRNVLFVSHFLPTYVLDLPGPYPK
PTPTPSRSRFVRMKLTRTRAPIAPGATPLPNTGNNSCPVLKTFHIKHCVGWALNLQSATR
LVNVHWEGQQCVYVELPTAEAAEQLLTVRAQTSECWGSATDPMPSIGCVDLERCPAAYDC
AETEATATISGPPPLAQQSASDDDKAGRKRKSCEMA
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgaagcggttcctattaactccagtggctgtagacccgacgtgtggcccatgcggcgcg
tacgtgacggagccccttgcgccgtttcgtcgacacgcgttagtgcagtatcttcgcacg
gttctacccgatgcgttagccttggactgtaaagtagacaatgcggacgacgaagatgtg
gtccgaaacccgtggagacgtcgtgtacgtatcgttgcagcgcgttgtagacgtcagaga
cgggcgttggtgctggccgacgagcagctcgcagacgacgagatacgcgagcggaacctc
agtttgattggctttacagcagtgctggacgtcattgtggccgctaggaagcccatcgta
ggacacaacatgctcctcgacctcatgcagtgctacgagaagttccacggaccgctacca
ggtcgctgctcggagttccaacgcgagttacacacgtggctgggtgccggtggtggcgta
tttgataccaagacccttgtagactacgcgatgcagaaggtggactcgttcgctactcat
ttggcgcatacggcgctcgagaactgctacgaagtgctgtccaaacatcctttctacggc
ccagaagtgcagtgcgtgcgtagtgtggacactgcacgtgacgaacaagtgggggcgtct
cagccaccgcttcaagcacatcaagcaggttacgacgccttcatgacgggatttgtcttc
cttcgtgtctgctctggccttggggtgtccaacgagtgcatcgctgccttggggaagacc
tcgcagtgtctggagagtagctcaaagcgctcggatgctctagaaaacctacgcaacgtg
ttgtttgtgagccactttctaccgacgtacgtgttggatctcccaggtccatatccgaag
cctactcccacaccatcgcgctctcggtttgtccggatgaagttgacgcgaacgcgtgcg
cctattgctccaggtgcaactcctttgccgaatacgggcaacaattcttgtccagtattg
aagacgttccacatcaagcattgtgtcggatgggctctaaacttgcagtcggcgacgaga
ctcgtgaacgtgcattgggaaggacagcagtgcgtgtacgtcgagttaccgactgccgaa
gctgcggagcaattactgactgtacgcgctcaaacgagcgagtgctggggctctgcgacc
gaccccatgccgtcgatcgggtgcgtcgacttggaacgatgccccgcagcatacgactgc
gcggagacggaggcgaccgcgacgatttcggggccgccaccgctcgcgcagcagtcggca
agcgacgacgacaaagccggcaggaaacgtaagagctgtgagatggcgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

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