KEGG   Phytophthora infestans: PITG_12304
Entry
PITG_12304        CDS       T01333                                 
Name
(RefSeq) TATA-box-binding protein, putative
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
pif  Phytophthora infestans
Pathway
pif03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PITG_12304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pif03000]
    PITG_12304
   03021 Transcription machinery [BR:pif03021]
    PITG_12304
Transcription factors [BR:pif03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    PITG_12304
Transcription machinery [BR:pif03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     PITG_12304
  RNA polymerase III system
    TFIIIB
     PITG_12304
  RNA polymerase I system
    SL1/TIF-1B
     PITG_12304
SSDB
Motif
Pfam: TBP PEP_hydrolase Mdv1
Other DBs
NCBI-GeneID: 9473298
NCBI-ProteinID: XP_002900907
UniProt: D0NJJ6
AA seq 163 aa
MRFDLTNLLVKSHRRAELVPKKNCILMKLHNPKATAMLFANGKLVCTGAETEDAIKNAAR
RFTQVIQKMDFPGVNLIDFKIQNVVGTCDMGFRVLVEALAFAHSDRCTYEPELYPALIYR
LEKPQVKVLVFVSGKVVFTDSKEPRELYSACEAIFPVCCYVVL
NT seq 492 nt   +upstreamnt  +downstreamnt
atgcgcttcgacttgaccaatctgctggtcaagtcacatcgacgtgcagagctagtgccc
aagaagaattgcattctaatgaaactccacaaccccaaggccactgcaatgctcttcgcc
aacggcaagctggtctgcacgggtgctgagacggaggacgccatcaagaacgcggcccgc
aggtttacacaggttatccagaagatggatttcccaggagtgaaccttatcgactttaag
atccagaacgtggtgggaacgtgtgatatgggctttcgagtgttggtggaggccctcgcc
ttcgctcacagtgaccgctgcacgtacgagccagagctgtatccggcgttgatctaccgc
ttagagaagccacaagtgaaagtcctggtgtttgtgagcggtaaagtggtctttacggac
tcgaaggaaccgcgagagttatattctgcctgcgaagctatcttcccggtatgttgttac
gtagttttgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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