KEGG   Phytophthora infestans: PITG_14885
Entry
PITG_14885        CDS       T01333                                 
Name
(RefSeq) DNA-directed RNA polymerase II 19 kDa polypeptide
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
pif  Phytophthora infestans
Pathway
pif03020  RNA polymerase
pif03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PITG_14885
  09124 Replication and repair
   03420 Nucleotide excision repair
    PITG_14885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pif03021]
    PITG_14885
   03019 Messenger RNA biogenesis [BR:pif03019]
    PITG_14885
   03400 DNA repair and recombination proteins [BR:pif03400]
    PITG_14885
Transcription machinery [BR:pif03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PITG_14885
Messenger RNA biogenesis [BR:pif03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PITG_14885
DNA repair and recombination proteins [BR:pif03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PITG_14885
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 9467993
NCBI-ProteinID: XP_002899067
UniProt: D0NP89
AA seq 177 aa
MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGV
IQDNSGFVCFNIRYRAILFRPFKNQVLDAVVTVVNQLGFFADVGPLQVFVSRHAMPTDLN
NGYDHESNAWISDDREVEIRKGCGVRLKIMGVSVDVTEINAIGTIKDDYLGLISSDN
NT seq 534 nt   +upstreamnt  +downstreamnt
atgttcttcctgaagcagctttcgcgcgatctcctgctgcacccgatgcacttcgggcct
aagttgcacgatattatccgtttgcgactaatcgaggaggtggagggcacgtcgatgggc
aaatatggctacgtcatcactgtcacagaggtgcgggacgaggatatcggcaagggcgtg
atccaggacaactcgggcttcgtgtgctttaatatccgctaccgcgccattctcttccgc
ccgtttaagaaccaggtgctggacgccgtcgtgacagtcgtgaaccagcttggattcttc
gccgatgtggggccactgcaggttttcgtgtcccgacacgccatgccaacggacctcaac
aacggctacgaccacgagagcaacgcgtggatctcggacgatcgcgaagtcgagatccgt
aagggctgtggtgtgcgactcaagatcatgggcgtcagcgtcgacgtcacggagatcaac
gctatcggaaccatcaaggatgattatttaggcctcatttcgtccgacaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (54)   

Download RDF
DBGET integrated database retrieval system