KEGG   Phytophthora infestans: PITG_20593
Entry
PITG_20593        CDS       T01333                                 
Name
(RefSeq) hypothetical protein
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
pif  Phytophthora infestans
Pathway
pif03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pif00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PITG_20593
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pif03009]
    PITG_20593
Ribosome biogenesis [BR:pif03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    PITG_20593
SSDB
Motif
Pfam: Utp12 WD40 ANAPC4_WD40 TFIIIC_delta PQQ_2 Nup160 Laminin_G_2 UTP15_C
Other DBs
NCBI-GeneID: 9480088
NCBI-ProteinID: XP_002895452
UniProt: D0P2M4
AA seq 642 aa
MQLFADSQTHFAAVSEDGRLKVWDVSNGALQQELKERDHLSYRYTSLAWTQPKTKGKKRS
GDSGLGLLALGTSSGIVVVWDLATGEVKHTLQADAVHGSGAVQALTFNPQGSLLYSSSSD
KHVLEWNVSNGKVERKFRCGSGGASALAVSADGEILAVGGSALRTFDLSSGKKSRKLVSG
LSTAVTQLRFANVETGIESSRFLFAATAGARFVNMYDLELTEHDAPALTFSLPSSADAVF
ARASVGEAVTKKSKKNKKSKKEKEAVKPVINLLVGATAAAGAMFLWAHKYQQVEDASELA
LASKPLPPTLSTAESAGILLAELSTQKDKTEVLVARGSLVKPVFETVSPVEENTPSQWKK
ELEFTEISDALLLTAERADKNGKRQKVEATAEDEKTHVPTLSERRALANSMAVVDDTTSF
EDLDGDEDEEDELTLAERVEALRERVEGDVTAALSRAERDADAPEDKDNKPDASSLASVL
EQALQARDNALLEYCLRTRDVKVVAKTVARVPASRVLALLEVIVRKLERSPNRFARLCPW
LRAVLLHHTAYLVAQPDLVPSLSALYQLLETRLQVHEQMQKLSGRLALVLGQIHVNNGNN
EQEDDETRAAVVYHEGEEEVEVDGDDSSQEEEDEDDVETEDE
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgcagctcttcgccgactcgcagacgcacttcgcggccgtgtccgaggacggccgcctt
aaagtgtgggacgtgtccaatggcgcgttgcagcaggagcttaaggaacgcgaccacctc
agctaccgttacacgagtctggcatggacacagcctaaaaccaagggcaagaagcgcagc
ggcgacagcggcctaggactactggcattaggcaccagcagcggcatcgtcgtagtctgg
gatttggccacgggtgaggtcaagcacacgcttcaggcggacgcagtgcacggctcgggc
gccgtacaggctttaacctttaaccctcagggctcgctgctgtactcgagctcgagtgac
aagcacgtacttgaatggaacgttagcaatggcaaagtggagcgaaaattccgctgcggt
tcgggcggcgcgtcggcgctcgcagtctcagcggacggagagattctggcagtcggcggc
tcggcgctgcgcacgttcgatttatcctcgggcaagaagagcaggaagctcgtgtcaggc
ttgtcgactgctgtgacgcagctgcggttcgctaatgtggagaccggcatcgagtcgtcc
aggttccttttcgcagcaactgcgggcgcacgtttcgtcaatatgtacgacttggagctg
acggagcacgacgcgccggccctcacattcagtctgcccagcagtgctgacgctgtgttt
gcacgcgcttcggtgggtgaagctgtgacgaagaagagcaagaagaacaagaagagtaaa
aaggaaaaggaggctgttaagcctgtgattaatctgctggtgggcgcgacggctgcggcc
ggtgccatgttcctctgggcgcacaagtatcaacaggtggaggacgcatcggagctggcg
ttggcgtccaagccgctgcctcccacgctctcaacagcggagagtgctggcatcttatta
gctgagcttagcacgcagaaggataagacggaggtgctggtggcgcgtggatctctcgtc
aagcctgtgttcgagacagtctcccctgtggaggagaatacgccgagtcaatggaagaaa
gagctcgagtttactgagatcagtgacgctctactactcacggctgagcgtgccgacaag
aacggcaagcgacagaaggtggaagctactgctgaagacgagaagacccacgtgccgaca
ctgagtgaacgtcgtgcactagccaactccatggcagtcgtagacgacaccaccagcttt
gaggacctggacggtgacgaggacgaagaggacgagctgacgctcgcagaacgtgtcgag
gctctacgtgaacgcgtcgaaggtgacgtgactgctgctcttagccgtgcggagcgtgac
gccgacgccccggaggataaggacaacaagcctgatgcttcgtcgctggctagtgttcta
gagcaggctctacaggcgcgtgacaacgctctattggagtactgcttgcgtacgcgtgac
gtaaaagtggtagccaagactgtggctcgcgtgccggcgtcccgtgtcctggcgctgctg
gaagtgatcgttcggaagcttgagcgctcgccgaaccggttcgcacgtctgtgtccgtgg
ctgcgtgcggtgctgctgcatcacacggcgtacctagtggctcagcccgatctcgtgcct
agtctatcagcgttgtaccagcttttggagacgagattgcaggtgcatgaacagatgcag
aagctgtcgggtcgcctggcgctcgtgttgggtcagatccacgtcaacaatggcaacaac
gaacaggaagacgacgagactcgcgccgctgtggtgtaccacgaaggagaagaggaagtg
gaggtcgatggtgacgatagcagccaagaagaagaagacgaggacgacgtagagactgaa
gacgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (52)   

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