KEGG   Pigmentiphaga sp. H8: EGT29_11460
Entry
EGT29_11460       CDS       T05719                                 
Symbol
bioD
Name
(GenBank) dethiobiotin synthase
  KO
K01935  dethiobiotin synthetase [EC:6.3.3.3]
K02169  malonyl-CoA O-methyltransferase [EC:2.1.1.197]
Organism
pig  Pigmentiphaga sp. H8
Pathway
pig00780  Biotin metabolism
pig01100  Metabolic pathways
pig01240  Biosynthesis of cofactors
Module
pig_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
pig_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP
Brite
KEGG Orthology (KO) [BR:pig00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00780 Biotin metabolism
    EGT29_11460 (bioD)
Enzymes [BR:pig01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.197  malonyl-[acyl-carrier protein] O-methyltransferase
     EGT29_11460 (bioD)
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.3  Cyclo-ligases
    6.3.3.3  dethiobiotin synthase
     EGT29_11460 (bioD)
SSDB
Motif
Pfam: AAA_26 Methyltransf_25 Methyltransf_12 Methyltransf_23 Methyltransf_11 Methyltransf_31 Ubie_methyltran MTS PCMT CbiA DUF938 PrmA CMAS
Other DBs
NCBI-ProteinID: AZG08422
UniProt: A0A3G8GMC8
Position
2401229..2402653
AA seq 474 aa
MTGRIHGRAVARRFGDAAGRYERHAGLQREVAEALAARIARLPLPERPRILEIGCGTGFL
AEALSRRLGPACWTLTDISPAMLETARRRLSLPGTCRFLAVDGEHPDAELGEFDLICSSM
AVQWFGDLDAGLARLGGLLAEGGWMAVATLAEGTFAEWRAVHADHGVRAAVRDYPRPADI
GAALPGLRRLMQAERRVLPHRDGMTFLRGLKAIGADAPAPGRRPLPPALFKRILHSFDTQ
GASVTYHLAYGTWSKGEAPRGVFVTGTDTGIGKTLVSAVLARAWQADYWKPLQTGVATEP
DDTGTVARLAGLAPERIHAPHAVLQAPLSPWAAAREEGAALSAADIALPATRAPLVVEGA
GGLLVPIDDRATMIDLIAHLGLPVVLVARSALGTLNHTLLSLEALRARGIPVAGVVMSGE
PSAGNRLGIEQFGKVRVLAEIPRLPAVDAETVAALARGIEPLERMLEAAGAAGA
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgacggggcggatccatgggcgggccgtggcccgccgtttcggcgatgcggcgggacgc
tacgaacggcacgcgggcttgcagcgcgaggtggccgaggcactggccgcgcgcatcgcc
cgcctgccgctgccggagcgcccgcgcatcctggagataggctgcggcacgggattcctg
gccgaggcgctgtcacgccggctgggaccggcatgctggacgctgaccgacatctcgccc
gccatgctggagaccgcgcggcgccgcttgtcgctgcccggcacctgccgtttcctggcc
gtggacggcgagcaccccgacgcggaactgggcgagttcgacctgatctgttccagcatg
gccgtgcaatggttcggcgacctggatgccggcctggcgcggctgggcggattgctcgcc
gaaggcggctggatggccgtggcgacgctggccgagggcaccttcgccgagtggcgggcg
gtgcacgcggaccatggcgtgcgcgccgcggttcgcgactacccccggcccgcggacatc
ggcgccgcgctgcccggcctgcgccgcctgatgcaggccgagcggcgggtgctgccgcat
cgcgacggcatgacgttcctgcgcgggctcaaggcaataggtgcggatgcgcccgcgccg
gggcgccggccgctgccgcccgccctattcaagcggatactgcacagtttcgatacacag
ggggcaagcgtgacctaccatctggcctacggcacctggagcaagggcgaggcgccgcgc
ggcgtgttcgtgaccggcaccgacaccggcatcggcaagacgctggtgtcggcggtgctg
gcgcgcgcctggcaggccgactattggaagcccttgcagaccggcgtggcgaccgagccc
gacgacaccggcacggtggcgaggctggccggccttgcgcccgagcgcatccatgcgccc
cacgcggtgctgcaggcgcccttgtcgccctgggcggccgcgcgcgaggaaggcgcggcg
ctgagcgcggccgacatcgcgcttcccgccacgcgcgcgccgctggtggtggagggcgcc
ggcggactgctggttcccatcgacgaccgggcgaccatgatcgacctaatcgcacacctg
gggctgccggtggtgctggtggcgcgcagcgcgctgggcacgctcaatcacacgctgttg
tcgctggaggcgttgcgcgcgcggggcatcccggtggcgggcgtggtgatgagcggcgaa
ccctcggcgggcaaccggctcggcatcgaacagttcggcaaggtccgcgtgctggccgag
atcccgcgcctgcccgcggtcgatgccgaaacggtggcggccctggcgcgcggcatcgag
ccgctggagcggatgctggaagcggccggagccgctggcgcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (3)   
   KEGG MODULE (5)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (2)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (2)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (45)   

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