KEGG   Paenibacillus sp. IHBB 10380: UB51_19435
Entry
UB51_19435        CDS       T03836                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
pih  Paenibacillus sp. IHBB 10380
Pathway
pih03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pih00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    UB51_19435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pih03021]
    UB51_19435
   03400 DNA repair and recombination proteins [BR:pih03400]
    UB51_19435
Enzymes [BR:pih01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     UB51_19435
Transcription machinery [BR:pih03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     UB51_19435
DNA repair and recombination proteins [BR:pih03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      UB51_19435
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L PASTA HHH_5
Other DBs
NCBI-ProteinID: AJS60253
UniProt: A0A0D3VD51
Position
complement(4270133..4271077)
AA seq 314 aa
MIEIEKPKIETVDVNEDGAYGKFVIEPLERGYGTTLGNSLRRIMLSSLPGAAVTSVQIDG
VLHEFSTVPGVKEDVTEIILNLKALSLKIHSDEEKVFEIDAEGEGVITAADIRADSDVEI
LNPDLHIATLGPGARLHMRIFASRGRGYVTADKNKRDDQPIGVIPIDSIYTPISRVNYGV
ENTRVGQVTNYDKLTLEIWTDGSIRPEEAVSLGAKILTEHLMLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTTKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRSEE
NT seq 945 nt   +upstreamnt  +downstreamnt
gtgattgaaatcgaaaagccgaaaatcgagactgtagatgtcaacgaagatggagcctat
gggaagttcgtaatagaaccgctggaacggggatatggtactactctagggaattcactt
cgacggatcatgttatcctcgctgcctggcgcagctgtaacatcggttcagattgacggt
gttctacatgagttctcaacagttccgggtgtaaaagaagacgtaacggagatcatcctg
aatctgaaagctctatcccttaaaattcattctgacgaagagaaagtgttcgagattgat
gctgaaggcgaaggagtaatcactgcagctgatattcgtgcggatagtgatgtggaaatc
cttaacccggatcttcacattgcaacattgggtcctggtgctagacttcacatgcgtatt
tttgcaagtcgtggtcgtggctatgttacagcagataagaacaagcgtgatgatcagcca
attggcgtcattccgattgattctatctacactccgatttcccgtgtcaattatggcgtg
gagaatactcgggttggtcaagtgacgaactatgacaaacttactctagaaatttggact
gatggtagcatcagaccagaagaggctgtgagtctcggtgccaagattttaactgagcat
ttgatgctgtttgtaggtcttacagatgaagctaaagatgcggagatcatggttgaaaaa
gaagaagacaaaaaagaaaaagtgcttgagatgacgatcgaagagcttgatctctcagtc
cgttcttacaactgccttaagcgtgctggtattaacacagtacaagagcttactactaaa
accgaagaagatatgatgaaggttcgtaacttgggccgcaaatctttagaggaagtacaa
gagaagcttgaggaacttggtttaggtctacggtcggaagaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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