KEGG   Psychromonas ingrahamii: Ping_0360
Entry
Ping_0360         CDS       T00450                                 
Name
(GenBank) hydroxymethylpyrimidine synthase
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
pin  Psychromonas ingrahamii
Pathway
pin00730  Thiamine metabolism
pin01100  Metabolic pathways
pin01240  Biosynthesis of cofactors
Module
pin_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:pin00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    Ping_0360
Enzymes [BR:pin01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     Ping_0360
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated DUF1999
Other DBs
NCBI-ProteinID: ABM02222
UniProt: A1SRV7
Position
462610..464580
AA seq 656 aa
MSNQVNSNLKTSSRKGLSRKASRRAAQDYIQNLNNESYPNSEKIFIKGELHPIKVAMRQI
HQADTLLAGSGEQPVFEKNEAIPVYDTSGPYTDPKTKIDVHAGLPKLRQSWIAARDDVET
LEGVTSNFAKARLANDSLDDLRFANRPKPLRAKKGQCVTQMHYARRGIITPEMEYIAIRE
NMGRDRVKCEALHFQHAGHSFGANLQEKITPEFVRQEVARGRAIIPSNINHPELEPMIIG
RNFLVKVNSNIGNSSVSSSIEEEVEKLVWSTLWGGDTVMDLSTGRNIHETREWILRNSPV
PIGTVPIYQALEKVKGVAEDLSWDVFRDTLIEQAEQGVDYFTIHAGVLLRFVPMTAKRVT
GIVSRGGSIFAKWCLSHHKENFAYEYFREICEICQLYDVSLSLGDGLRPGSVADANDQAQ
FAELEVLGELTKVAWEYDVQVIIEGPGHVPMQMIKENMDKQLDDCFEAPFYTLGPLTTDI
APGYDHITSGIGAAQIGWYGCAMLCYVTPKEHLGLPNKDDVKVGLITYKIAAHAADLAKG
HPGAQIRDNALSKSRFEFRWEDQFNLGLDPVTAREYHDETLPQESGKVAHFCSMCGPKFC
SMKITQDVRDFTAKLDSGEISIKILDETITMTAAEGMALKAKEFNDSGAEIYQPVL
NT seq 1971 nt   +upstreamnt  +downstreamnt
atgtctaatcaagtaaactcgaatttaaaaaccagcagccgtaaaggtttatcccgcaaa
gcctcccgccgagcagcgcaggactatattcaaaatctcaataacgaatcctaccccaat
tcagaaaaaatttttattaagggtgaacttcatccgattaaagtggcaatgcgacaaatt
catcaggccgatactttgctggcaggcagtggagaacagcccgtttttgaaaaaaatgaa
gctattcccgtttatgatacttccggcccttatacggatcctaaaacgaaaatagatgtg
catgccggcttacctaaattacgtcaatcctggattgctgcccgtgatgatgttgaaaca
ctggaaggtgtcacctcaaattttgccaaggcacgtttggctaatgacagtttagatgat
ttgcgctttgcaaatcggcctaaacccttacgcgctaaaaaaggacaatgtgtcacccaa
atgcactatgcacgccgaggtattattacccctgaaatggaatacattgctattcgtgaa
aacatgggccgtgaccgcgtaaaatgtgaagcgctgcattttcagcatgcgggtcatagt
tttggtgccaatctgcaggaaaaaataaccccggagtttgtgcgtcaggaagttgctcgc
ggacgtgccattatcccgtccaatattaatcatccggaacttgagccaatgattatcggc
cgtaattttctggtaaaagtaaattctaatattggtaactcttcggtaagctcttcaatt
gaagaggaggttgaaaagctggtttggtcaacgctgtggggtggtgatacggtaatggac
ttgtcgaccgggcgtaatattcatgaaacccgtgaatggatcctgcgtaactctcccgtg
ccaatcggtacagtacctatctatcaggcactggaaaaagtaaagggtgtggctgaggat
ctcagttgggacgttttccgtgacaccttaattgaacaggccgagcaaggggtggattat
tttactattcatgccggtgtattattacgttttgtgccgatgacagcaaaacgtgttacg
ggtattgtgtctcgcggcggttcaatctttgcaaagtggtgcttatcgcatcataaagaa
aactttgcttatgaatattttcgcgaaatttgtgaaatctgtcagctatatgatgtgtca
ttatctttaggtgatggtctgcggcccggatcagttgcagatgctaatgatcaggcacaa
tttgcagaattggaagtgttaggcgaactgactaaagttgcctgggaatacgatgtacag
gtgattattgaaggtccgggtcatgtgccgatgcagatgattaaagagaatatggataaa
cagctggacgattgttttgaagcgccattttataccttagggccgctaaccacggatatt
gcaccgggatatgatcatattacgtcgggcataggtgccgcgcaaattggttggtacggt
tgtgcaatgctttgttatgtcaccccaaaagagcatttaggtctgccaaataaagatgat
gtaaaagtcggtttaattacttacaaaattgcagcgcatgccgcggatttagcaaaaggg
catccaggtgcgcaaattcgtgataatgccttgtcaaaatcacggtttgaatttcgctgg
gaagatcagtttaacctcggtttagatccagtcaccgcacgagaatatcatgatgaaacc
ctgccgcaggaatccggaaaagtcgcgcatttctgctcaatgtgcgggccaaaattctgt
tcaatgaaaattactcaggatgtgcgtgatttcactgcaaaattagattcaggtgagatc
agtattaagattttagatgaaactattactatgacagcagcagaaggcatggcacttaaa
gccaaagaatttaacgactctggtgctgaaatttatcagccagttttataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (3)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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