KEGG   Psychromonas ingrahamii: Ping_1135
Entry
Ping_1135         CDS       T00450                                 
Name
(GenBank) cell elongation-specific peptidoglycan D,D-transpeptidase
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
pin  Psychromonas ingrahamii
Pathway
pin00550  Peptidoglycan biosynthesis
pin01100  Metabolic pathways
pin01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:pin00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Ping_1135
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Ping_1135
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pin01011]
    Ping_1135
Enzymes [BR:pin01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Ping_1135
Peptidoglycan biosynthesis and degradation proteins [BR:pin01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   Ping_1135
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: ABM02972
UniProt: A1SU07
Position
complement(1422924..1424810)
AA seq 628 aa
MVKKRIPIRNHSAESALFMRRTLVIFIAIVIAIGVLISNLYYLQITSFEKYQTRSNDNRI
SVQTISPNRGLIYDRNGIIIAENRPVYNLQVIVNKTENLDENILELQKLLALTDQEIKNF
NEQNRYARSFKAIIIRQQLSEKEVALFSVNQHRFKGFSIQANLKRFYPFADTFTHALGYI
AKINSADLRRIEKRGESARYRATEYIGKLGIEKYYEDLLHGEPGQRQVEVDSWGKVIRTL
SFTPPIPGKDIILNLDVKLQLKAQQLLGENRGSVVILDANTGGVLSLVSSPSYDPNLFVQ
GISQREYQALLQSKDRPLINRATQGRYPPASTIKPQMALLALDASVITEQTEIFDPGWWI
VPNSKRRFRDWKQWGHGTVDVHKAIEQSCDTFFYQTAYKTGIDRMSPFMKKFGFGNYSGL
DIGEETKAIMPSREWKKARFNEQWYDGDTISVGIGQGYWTVTPIQLTKATAILARKGKVI
EPHMLQSIISGESTFTPTREAQKPIQLKDDHYWEVALDAMYAVTNKKAGTADKAFVGTSY
SVAGKSGTAQVVNIKENESYDADSMKERHRDNAMFVAFAPFKEPEIVASVVLENAGGGSS
HAAPIVRSLFDEYFKNTSPSPATQSLGL
NT seq 1887 nt   +upstreamnt  +downstreamnt
gtggttaaaaaacgcattcccataaggaatcattccgcagaatccgcactctttatgcgc
cgtactctggtaatttttattgcgatagtcattgcaataggggtattaattagcaacctc
tattacctgcaaataacctcctttgaaaaatatcaaacacgttcaaatgacaaccgtata
agtgtacaaacgatctcgccaaacagaggccttatttatgatcgtaatggcatcattatt
gccgagaaccggccagtttataatctgcaggtgatcgttaataagacagaaaatttagat
gaaaatatccttgaattacaaaaattattagcgttaacggatcaagaaatcaaaaatttt
aacgaacaaaaccgttatgcaagatccttcaaagctatcatcattcgccaacaattaagc
gaaaaagaggtcgctctttttagcgttaatcaacatagatttaaaggcttttcgattcaa
gcgaatcttaaacgtttttatccttttgctgataccttcacgcatgctttgggttatatc
gccaaaattaatagcgctgacctgcgacgaattgaaaagcggggcgaaagcgcacgttat
cgggcaacggaatatatcggtaaactgggcatcgaaaaatattatgaagatttattacat
ggggagcctggccaacgtcaagttgaagtagacagttggggaaaagtaatacgtactctg
agctttaccccgcctatcccgggaaaagacattatattaaaccttgatgtcaaactgcaa
ttaaaagcacaacaattattgggtgaaaatcgcggtagcgtggttatactggatgcgaac
acaggtggcgttttaagtttagtctccagtccaagttatgatcctaacctttttgtgcaa
ggcataagtcagcgggaatatcaggcactcctgcaatcaaaagaccgtccgctgattaac
cgggccactcagggacgctatccgccagcctcaaccattaaaccacaaatggctttgctc
gcgttagatgccagtgttataaccgaacaaacagaaatattcgatcctggttggtggatt
gtccccaattctaaacgccgctttcgtgattggaagcaatggggccatggtacagttgat
gttcacaaggccatagaacaaagctgtgatacctttttttatcaaaccgcctataaaacg
ggtattgaccgcatgagtccttttatgaaaaagtttggttttggcaattatagtggtctt
gatataggggaagaaacaaaagcaatcatgccttctcgtgaatggaaaaaagcaagattt
aacgagcaatggtacgacggtgatacaatatcggtgggtatcgggcaaggttactggacg
gttacaccgattcaactaaccaaagccacggcaatcttagcccggaaaggtaaggtaata
gagccacatatgctgcagtccattatttcaggggagagtacttttacccccacacgcgaa
gcgcaaaaaccgatccagctaaaggatgatcattactgggaagtcgccttagatgctatg
tatgccgttactaataaaaaagccggtactgctgataaagcatttgtcggcacctcctat
tccgtagccggtaaatcgggtacggcacaggttgttaatatcaaagaaaatgaatcctat
gatgccgatagcatgaaagagcgtcatcgggataatgcaatgtttgtagcatttgcgccc
tttaaagagcctgaaattgtcgccagtgttgttctggagaatgccgggggtggtagcagt
cacgcagccccgattgtccgttctttgtttgatgaatattttaaaaatacgtcaccctct
cctgctactcaatcgttaggcttataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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