KEGG   Psychromonas ingrahamii: Ping_1193
Entry
Ping_1193         CDS       T00450                                 
Name
(GenBank) Excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
pin  Psychromonas ingrahamii
Pathway
pin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Ping_1193
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pin03400]
    Ping_1193
DNA repair and recombination proteins [BR:pin03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Ping_1193
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH_5 HHH UVR HHH_2 HHH_3 GIY_YIG_2
Other DBs
NCBI-ProteinID: ABM03027
UniProt: A1SU62
Position
1485929..1487758
AA seq 609 aa
MSDFCPTDFLKTVTSEPGVYRMFNQQKVIYVGKAKNLKKRLSSYFSLTQKHPKTLALVSH
IDRIEVTVTHTETEALILEHNFIKRYKPHYNVLLRDDKSYPYLFLSDHKHPQLTLVRTQN
SKRKGTYFGPYPSGGAVRESLHLMQKLFPIRQCEDSYYSNRSRPCLQYQLKRCLAPCVNA
MPESEYQHQVELASAFLQGKSQNVINQLVDEMEVASQTLEFEKAAVRRDQIQSLKKVQEQ
QWVSGDIEQLDVVGFSYEQGFASIHLLFVRQGRILGSRNYFPKIPKNSSKDEVLSAFLSQ
FYLSGQNGRAIPREILLSDDFAERAIFTDLFTEYCGYKTALKVDVRGERARFVKLAQKNA
QIALQSHLSQKNNILKRYQLLEAKLDLSKPILRMECYDISHMMGEKTVASCVVFNREGEK
KSDYRRFNITGITPGDDYAAMGQVLARRFKALQETENIPDIIFIDGGVGQLNQAENIISS
LEENFKDKYPLLIGIAKGEGRKPGLETLILAGTHEIIELSSDSPALHLIQQIRDESHRFA
IMGHRQQRDKTRRTSTLENISGVGTKRRQALLNHLGGLQGVMSASIDELQKIPGISASLA
ETIYEALHN
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgagtgatttttgcccgaccgattttttaaaaacggtcacctctgaaccgggtgtctac
cgcatgtttaaccaacaaaaagtgatttatgttggtaaagcaaaaaacctgaaaaaacgc
ctcagcagttattttagccttacccaaaaacaccctaaaacattagcgctggtcagtcat
attgacagaattgaagtgacggtcacgcacactgaaactgaagcactgatcctcgaacac
aactttatcaagcgttacaagcctcattataatgtgttgttacgtgatgataagtcttat
ccttacctgtttttaagtgaccataaacatccacaactgactttagtgcgtacccaaaat
agtaaacgaaaagggacctattttggcccctatccgagtggtggggcggtgagagaaagt
ctgcatttaatgcaaaaactgtttccaatacgtcaatgtgaagacagttattacagcaat
cgctcccgtccctgtctgcagtatcaattaaaacgttgtcttgcgccctgcgtcaatgcg
atgccggaatctgaatatcagcaccaagttgaattagccagtgccttcttacaaggtaaa
agtcaaaatgtgataaatcagctggttgatgaaatggaagtggcaagtcagacccttgaa
tttgagaaagcagcggtgcgacgcgatcaaatccaatccttaaaaaaagtgcaggaacag
caatgggtcagcggtgatattgaacagttagatgttgtcggtttcagttatgagcaaggt
tttgccagtatacacctactgtttgtccgtcaggggcgaatattaggtagccgtaattat
tttcctaaaatccccaaaaactcgagtaaagatgaagtgttaagcgcttttttaagccag
ttttatctgtccgggcaaaatggacgcgcaataccaagggaaattttgctcagtgatgat
tttgctgaacgtgctatttttactgatttatttactgaatattgtggctataaaacagca
ttaaaagtagatgtgcgtggtgagcgtgcgaggtttgtcaaactggcacaaaaaaatgcc
caaatagcattacagagccatctcagccaaaaaaacaacatattaaagcgttatcagctg
ctggaggcgaaattggacttaagtaaaccgattttgcgcatggaatgttatgatatttcg
catatgatgggggaaaaaacagtcgcatcctgtgttgtgtttaatcgtgagggggaaaaa
aaatctgattaccgtcgttttaatattactggtattacgcctggcgatgactatgcggca
atgggacaagtgctagcgcgacgttttaaagcgctgcaggagacagaaaacattcctgat
attatttttatcgacgggggggtggggcaattaaaccaagctgaaaatattattagctct
cttgaagaaaactttaaagataaatacccgttattgataggtattgccaaaggcgaaggc
cgtaagcctggcttagaaacacttattttagccggaacccacgaaattattgaattgagc
agtgattcacctgcgctgcatttaatacagcaaattcgtgatgaatcgcatcgttttgcg
attatggggcatcgccagcaacgtgataaaacaagaagaacaagtacattagaaaatatc
agtggagtaggcactaaacgtcgtcaggcgttattaaaccacttagggggattacagggt
gttatgtccgcaagtattgacgaattgcaaaaaattcccggcataagcgcttcattagct
gaaacaatttatgaagctttgcataattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (65)   

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