KEGG   Pediococcus inopinatus: PI20285_03740
Entry
PI20285_03740     CDS       T05337                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
pio  Pediococcus inopinatus
Pathway
pio03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pio00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PI20285_03740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pio03400]
    PI20285_03740
Enzymes [BR:pio01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PI20285_03740
DNA repair and recombination proteins [BR:pio03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PI20285_03740
SSDB
Motif
Pfam: PriA_3primeBD PriA_C ResIII DEAD PriA_CRR Helicase_C PIF1 UvrD-helicase AAA_30 AAA_19 zinc-ribbons_6 SLFN-g3_helicase T2SSE Raptor_N NACHT
Other DBs
NCBI-ProteinID: AVK99816
UniProt: A0A0R2IE08
Position
721339..723753
AA seq 804 aa
MVQIAKVIVDVPTMQTNNPYSYFVPTQIETDIQVGMRVVVPFGNGNRKIQGFVVALETKA
EEKNPLKNIESLMDLEPVLNPELIQLSSWLADTTFAFQITCLLTMLPNVMRAKYTKQLKI
LDPEVSSESLAKILPEDEWKDFQPDQLTPKQQSELLKLRKKNQIEIIYKVKNQAHSKQVF
QIKSQLSEEEEPKIMASLRKNAVKMRNLVHYLAFHQTAIKQVEIEKELKITAATIKNAEE
RGWLTRKKVEQYRDPYAMNKKLTLPLQLNSEQKVALDQVTKSIKDQQSRTFLLEGVTGSG
KTEVYLQTIAYALAQNKTAIMLVPEITLTPQMVSRVKGRFGKQVAVLHSGLSDGEKYDEW
RRIKRHEAQVVVGARSAIFAPIENVGVIIIDEEHETSYKQDDTPRYHARNVAQWRSEYHN
CPLVLGSATPSLESRARSERNVYQLLRLPDRINGHPLPKVKIVDMREELQSGANQNFSDP
LLAAIKNRLNLKQQSILMLNRRGYSSFIMCRDCGFVLKCPNCDISLTLHMDNHRMKCHYC
GHEEPIPKQCPNCHSEKIRYYGTGTEKVEKELQAQFPEARILRMDVDTTRRKGSHERILQ
KFGQQQADILLGTQMIAKGLDFPNVTLVGVLNADTALELPDFRSSERTFQLLTQVSGRAG
RADKLGEVFIQTFNPDHYAIQLAKSQNYENFFRKEMYIRHQEKYPPYYYTLQITAAHKEE
KVAAQKMYTVLNELKPSLSPDAIVLGPTPKPIARVKNKYYYQIVIKYKNEPQLHEAVTKI
LQESQADYRLGIQLSIDSEPQSFM
NT seq 2415 nt   +upstreamnt  +downstreamnt
atggtccagattgccaaagtaattgttgatgttcctacaatgcaaacaaataatccgtat
tcatattttgtcccaacccaaattgaaactgacattcaggttgggatgcgggttgttgtg
ccatttggcaatggtaatcgaaaaatccaaggatttgtcgttgcacttgaaacaaaagca
gaagagaaaaacccgctaaagaatatcgaaagcttaatggatttggagcccgttttaaat
cctgaattgattcagttatctagttggttggcagatacaacatttgcttttcagattacc
tgtcttttaaccatgttacctaatgttatgcgggcaaagtatacaaaacaattgaagatc
cttgatcctgaagtttcgagtgagagtttggcaaaaattctccccgaagatgagtggaaa
gattttcagcctgatcaattaacaccgaaacaacaaagtgagttattaaaactacgaaaa
aaaaatcaaattgaaattatttataaggttaagaatcaagctcattctaagcaagttttt
caaatcaagtcgcaattaagtgaagaagaagaaccaaaaattatggcatcattacgcaaa
aatgcagtcaagatgcgtaatcttgttcattatttggcgtttcatcagactgcaattaag
caggttgagattgaaaaagaattgaaaattacagctgctacaattaagaatgcagaggaa
cggggctggcttactcgtaaaaaagtggaacagtatcgagacccgtatgctatgaacaag
aagttaactttaccattgcagttgaattcagaacaaaaggttgctttagatcaggtaact
aaaagcataaaagaccagcaatcacggacttttctattagaaggtgttactggaagtgga
aaaacagaagtctatttgcaaacaatcgcttatgcgttggcgcaaaataaaacggctatt
atgttggttccagaaattactttgacaccgcagatggttagtcgggtcaagggacgattt
ggcaaacaagttgctgttttgcacagtgggttatcagatggtgaaaagtatgatgaatgg
cgcagaatcaagcggcatgaagcccaagtagttgttggcgcgcggtcggcaatttttgca
ccaattgaaaatgtcggagtcatcattatcgatgaagaacatgaaaccagttataaacaa
gatgatacaccgcgttatcacgcaagaaatgtggctcaatggcggagtgaatatcataat
tgtccgttagtgcttggaagtgcaactccctcgttggaatccagagcgcgtagtgagcgc
aatgtttaccaattacttcgtttaccagatcgtatcaacgggcatccattaccaaaagta
aaaattgtggatatgcgtgaagagctacagagcggcgcaaatcaaaatttttctgatccg
ttgttggcagcaattaaaaatcggttgaatttgaaacaacaaagtattctgatgctaaat
cggcgtgggtattcatccttcattatgtgtcgagactgtgggttcgttttgaaatgtcct
aattgtgatatttccttaaccttgcacatggataatcaccggatgaaatgtcactattgt
ggacatgaagagccaattccaaaacagtgccctaattgtcatagtgaaaaaattcgttac
tatggaacggggactgaaaaagttgaaaaagagcttcaggctcaatttccggaagcacga
attttgagaatggatgttgatactacaaggcggaaaggttcccatgaacgaattttacag
aaatttgggcaacaacaagccgatattttgttaggaacacaaatgatcgctaagggacta
gattttcctaacgtaaccttagttggtgttttaaacgcagatacggctttagaattgcca
gatttcagatctagtgagcggacttttcagcttttaacgcaagttagtggccgggccggc
agggctgataaattaggcgaagtttttattcaaacatttaatcctgaccattatgcaatt
cagcttgccaaatctcaaaattatgaaaactttttccgaaaagaaatgtatattcgtcat
caggaaaaatatccgccgtactattacacgcttcagatcactgctgctcataaagaagaa
aaagttgcggctcaaaagatgtatactgttttaaatgagttaaaaccatctttaagtccg
gatgccattgtgcttggaccaacgccgaagccaattgcgagagttaaaaataaatattat
tatcaaattgtgattaaatataaaaatgaacctcaattacatgaggctgtcactaaaatt
ttacaggaatctcaagctgattatcgactaggaattcaactttctatcgattcagaacca
caatcatttatgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (25)   

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