KEGG   Pediococcus inopinatus: PI20285_04415
Entry
PI20285_04415     CDS       T05337                                 
Name
(GenBank) deoxyribonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
pio  Pediococcus inopinatus
Pathway
pio03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pio00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PI20285_04415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pio03400]
    PI20285_04415
Enzymes [BR:pio01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     PI20285_04415
DNA repair and recombination proteins [BR:pio03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     PI20285_04415
SSDB
Motif
Pfam: AP_endonuc_2 DASH_Dad1
Other DBs
NCBI-ProteinID: AVK99943
Position
complement(870989..871909)
AA seq 306 aa
MLLGSHVSMKAPKMFLGSVETAVSYRANIFMIYTGAPQNTRRKPISELNIPKGQQLMADH
QISDLIIHAPYIVNLGNTKKPESFEFGVNFLKEEIKRADALGASNIVLHPGAHVGAGPDL
AIAQIVKGLNEILSETQQVNIAIETMAGKGTEVGKTFEEIGSIVHQVKLQSKISVCLDTC
HTNDAGYAIREDFDGVLEEFDQKIGLAYLKVIHLNDSKNEQGSHKDRHENIGLGTIGFNA
LNTIAHHPQLTNIPKIMETPWVKDPSNAKVKYAPYGYEIAMLEHQVFNPNLVSDILSQKS
VDTFLK
NT seq 921 nt   +upstreamnt  +downstreamnt
atgttattaggatctcacgttagtatgaaagcgccaaaaatgtttctcggatctgttgaa
accgcggttagttatcgtgctaacatcttcatgatttatacaggagctcctcaaaacacc
cgacgcaagcccatttctgagcttaatattccaaaaggccagcaacttatggccgatcat
cagatttcagatttaatcattcatgccccatacattgtgaatttgggaaataccaaaaaa
ccagaaagttttgagtttggtgtaaattttttgaaagaagaaattaaacgtgcagacgcc
ttgggtgcgagcaatattgttttacatccaggtgcccatgttggcgctggccctgattta
gcgattgctcaaattgtgaaagggttaaacgaaatcttatccgaaactcagcaagttaac
attgccattgaaacaatggctggtaagggaaccgaggtcggaaagacatttgaagaaatt
ggctcaattgtccaccaagttaaacttcaaagtaaaatttctgtttgtttagatacttgc
catacaaatgatgcgggatacgccatccgtgaagattttgatggggtacttgaagagttt
gaccaaaaaattggtttggcctatttaaaggtcattcatttaaatgattctaaaaatgag
cagggtagtcacaaagatcgtcacgaaaacatcggattagggacaatcggctttaatgct
ttgaacaccattgcccatcatccgcaactaacgaatattcccaaaatcatggaaacacca
tgggttaaagatccatcaaacgcaaaggtaaaatatgccccgtatggatacgaaattgcg
atgttagagcatcaagtttttaatccaaacctggtgtcagacattctttctcaaaaatca
gttgatacctttttaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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