KEGG   Pirellula sp. SH-Sr6A: VN12_00820
Entry
VN12_00820        CDS       T04360                                 
Name
(GenBank) hypothetical protein
  KO
K19720  collagen type III alpha
Organism
pir  Pirellula sp. SH-Sr6A
Pathway
pir04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pir00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    VN12_00820
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pir00536]
    VN12_00820
Glycosaminoglycan binding proteins [BR:pir00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   VN12_00820
SSDB
Motif
Pfam: DUF2207_C
Other DBs
NCBI-ProteinID: AMV30625
UniProt: A0A142XUR6
Position
250134..254318
AA seq 1394 aa
MNSMLPAIGIQASARQRFSLSRSIAIRMPTTSAKAIQSASASQTGTVSRETLLDYLQTAA
KSMRRLELGIGVVLWLTGVLMLIVLAVFVDHWVAPLPRLARLLFCAAIVFFSLWWIPKRV
FPLLLKPIHPEHAARKIESLYPGMKESLISWLQLSTADDPTPRGVLAVVGRFAARNLHGA
DSGSVLDTGSLLKWTTFFVTSLLAFLIYSFAAPKSSVVSLARILMPFAAIDPASRVQILE
VSPGSTTITQGTNLIVSVSTRGMYKQDEVHLRYDLSDGQKVGQRVKLKPEIEGLSYSVHF
GEGIGGLHQPFTYWIEAGDAVEGPFDVKIQTVPLIAIDRLQLQFPPYTKLKDRTILKDGS
CEVPEGTRVQLFAHANQPLAKARIEFNPVLERGILLQASSLLDLKVQTTELHGDWLALLN
EEKSSPTLHRYRIKGTNTLGEQNSDPVIYQLKVLADIAPTVNLASDVPASIEVPEDQPLD
LEFRARDPDYGLASLRAIVHPLPRREQATPIANSTLFETETGTIEQVLKSYRLSPRELGL
RTGDRVEVFAVATDNRRKPGTDTLEPNERESSHIEVKVVAATARTETKDPKDAAKEPPKT
SDLTKPQDPKGNGKGNPTKQNDQKGKNNNSGASGGQESSGAQTDSSQSGAGGGASGEEST
QGKGKGKGTGQGGSSGQSGNSDSTNEGGQGTGQGGSNASGTGSSSSGGNQSATSQPSGSQ
GAGSGDPQNDASSGSESSEPNGSESGSESGGSSGSQSGSQGGSQSGTQNGSNATSPSTPS
GDESGKSPEHDGEAFDAINEYRQQREQSPTQSGDQSGGESGGESSPQTGGQPGESGQQRQ
PGQPRPPQPVTNQPGTNQPGTNQPGTNQPGTNQPGANQPGANQPGANQPGANQPGANQPG
ANQPGANQPGANQPGANQPGANQPGANQPGANQPGANQPGANQPGANQPGANQPGANQPG
ANQPGGESGSKSGGQPGQQSQPGQPSPSPQSAGEPGANQPGGESSSQSGSPDSSSQQNPG
PKAAPQPGGESGSQSGGQPGQQSQPGQPRPSPQSAGEPGTNQPGGESSSQSGSPDSSSQQ
NPGPKAAPQTGGESGSESGGQPGQPSQPRQPSQPSPSPQSAGEPGANQPGGESSSQSGSP
DSSSQQNPGPKAAPQTGGESGSQSGGQPGQPGQPRQPSPSPQSAGDPGANQPGGSPDNPS
SSQPGAESSQPSGSQPSSQPGSDSATPSGESQSASEGGKPSDRGNISGNMRSATSSNAGV
VKSDGRDVLPPRNPMDTTYADKQTDLALQYLKEQRDQPDPELLRKLNWSKEDMQRFIDRW
SKAKEEARTDPDKKRDLDAALRSLGLKKSGSKVQGTTDQDDQLRGYLEDGSRVRPPESLR
ERLERFRKAANRIE
NT seq 4185 nt   +upstreamnt  +downstreamnt
atgaattcgatgctccctgcgatcgggatccaggcatcagcacgtcaacggttctccttg
tctcggtcgattgccattcgcatgccaaccacttccgccaaagcaattcaatctgccagc
gcgtcccaaacgggtacggtaagccgagaaactcttttggattatttgcagaccgcggcc
aaatcgatgcgtcgattggagctggggatcggcgtggtgctttggttgaccggcgtcctc
atgctgatcgtcctggctgtgttcgtggaccactgggtcgctccccttccgagactcgct
agactcctcttttgtgcagcgatcgtcttcttttctttgtggtggattccaaagcgagtc
tttccgctgctcctcaaacccattcaccccgaacacgcggcccgcaaaatcgaatccctt
taccccgggatgaaagaaagcctcatcagttggttgcagctatcgaccgcggacgatccg
acaccccgcggagtgctcgcagtcgtgggacgattcgcagctcgcaatctccacggcgcc
gactccggcagcgttctcgacaccggatcgttgctcaagtggacgaccttctttgtgacc
tcgctcctcgcatttttgatctatagcttcgcagcccccaagagcagcgtcgtttcgctc
gcgcgcatcctcatgccctttgccgccatcgatcccgcgtcgcgtgtccaaatcctcgag
gtgagtccaggctcgacaaccatcacgcaaggcaccaatctcatcgtttccgtcagcacc
cgcggaatgtacaaacaagacgaagtgcaccttcgatacgacctctccgacggccaaaag
gtcggtcaacgggtcaaactcaagcccgagatcgaagggctcagctactcggtccacttc
ggcgaggggatcggcggcctccaccaaccctttacctactggatcgaagcgggcgatgcg
gtcgaaggtcccttcgatgtcaaaatccaaacggtccctcttatcgcgatcgatcggcta
caacttcagttcccaccctacacgaaactgaaggatcgaaccattctcaaagatggatcg
tgcgaagttcctgaaggcactcgggtgcaactatttgctcacgcgaaccaaccgttggcg
aaggcccgcatcgaattcaaccccgtgctggaacggggaatcctcctgcaggcctccagc
ctattggatctgaaagtccagacgacagagctccatggggattggctggctctcctcaac
gaagagaaaagtagcccaaccctccaccgctatcgcatcaaaggaacgaacactctcggc
gaacagaactcggatcccgtgatctaccaactaaaggtccttgccgatatcgctcccacc
gtcaacttggccagcgatgttcccgccagcatcgaggtcccggaagaccagcctctcgat
ttggagttccgcgctcgagatccggactacggactcgcgagcttgcgcgccatcgtgcat
cctttgccgagacgagaacaagccactccgatcgccaactcgacgttgttcgagacggaa
acgggcacgatcgaacaggtcctcaaatcctaccgactctcgccgcgagagctgggactc
cgcaccggcgatcgcgtcgaagtctttgctgtcgccaccgacaaccgccgcaaacccggt
accgataccttggaaccgaacgaacgagaatcgagccacatcgaagtgaaagtggtcgcg
gccactgcacgcaccgaaaccaaagatccaaaggatgcagccaaagagccccccaagacg
tcggacctgaccaaaccacaagaccccaaggggaatggcaaaggaaacccgacgaaacag
aacgaccaaaagggcaagaacaacaactccggtgcatcgggtggtcaagaatcgtccggc
gcccaaacggactcgtcgcagagcggcgcgggtggcggagcatccggtgaagaatccacc
caaggcaaagggaaaggaaaaggaaccgggcagggaggtagttccgggcagtcaggcaat
tcggattctaccaacgaaggtggccaagggaccggacaaggaggctcgaacgcgtccggc
acaggctcctccagctctggaggcaatcagagcgcaacgtcccaaccgtctggttctcaa
ggagctggctcgggcgatccgcaaaacgacgcatcaagcggatcggaaagcagcgagccc
aacggatcggaaagcggctccgaaagcggtggatccagcggctcccagagcggatcgcaa
ggcggatctcaaagtggaacgcaaaatggctcgaatgccacttctccgtcgacgcctagc
ggagacgagtctggcaagtcgccggaacacgacggcgaagcgttcgacgccatcaacgaa
tatcgacagcagcgcgaacaatcccccacccaatccggcgatcaatccggcggagaatct
ggaggagaatcatccccccaaaccggcggccaacccggcgaatccggtcaacaacgtcaa
cctggtcaacctcgtcccccccaacccgtcaccaaccaacccggcaccaaccagcccggc
accaaccagcccggcaccaaccagcccggcaccaaccagcccggtgccaaccaacccggt
gccaatcagcccggtgccaatcagcccggtgccaaccaacccggtgccaaccaacccggt
gccaaccaacccggtgccaaccaacccggtgccaaccaacccggtgccaaccaacccggt
gccaatcagcccggtgccaatcagcccggtgccaatcagcccggtgccaatcagcccggt
gccaatcaaccaggtgccaatcaaccaggtgccaatcaaccaggtgccaatcagcccggc
gccaatcagcccggcggagaatccggctccaaatccggcggtcaacccggtcaacaaagt
caaccaggtcaacctagtccctccccacaatccgccggagaaccaggcgctaatcaaccc
ggcggagaatctagctcccaatcgggttcccccgattcttccagtcaacaaaatcccggc
ccgaaggccgctccccaaccgggcggagaatccggctcccaatccggcggtcaacccggt
caacaaagtcaaccaggtcaacctcgtccttccccacaatccgccggagaaccaggcact
aatcaacccggcggagaatctagctcccaatcgggttcccccgattcctccagtcaacaa
aatcccggcccgaaggccgctccccaaaccggcggagaatccggctccgaatccggcggt
caacccggtcaacctagtcaacctcgtcaacctagtcaacctagtccctccccacaatcc
gccggagaaccaggtgccaatcaacccggcggtgaatctagctcccaatcgggttccccc
gattcttccagtcaacaaaatcccggcccgaaggccgctccccaaaccggcggagaatcc
ggctcccaatccggcggtcaacccggtcaacccggtcaacctcgtcaacctagtccctcc
ccacaatccgccggagacccgggcgctaatcaacccggagggtcgcccgacaacccatcc
agcagccaacccggagcagaatcctcccaaccatctggctcccaacccagcagtcagccc
ggtagcgattccgccaccccatccggcgaaagccaatccgcctccgaaggaggcaagccc
tccgatcgcggaaatatctccggcaacatgcgttcggccaccagctcgaatgcgggagtc
gtcaaatccgacggtcgcgacgttctcccacctcgcaatcccatggacacgacctacgca
gacaaacaaaccgacctcgccctccaatacttgaaagagcaacgagatcagcccgatccc
gaactcttgcggaaactcaattggtcgaaagaggacatgcaacgcttcatcgaccgctgg
tccaaagcaaaagaagaggccagaacggatccggataagaaacgggatctcgatgcggcc
cttcgatcgttgggactgaagaaatcaggaagcaaagttcagggaacgaccgatcaagac
gatcaactgcgaggatatctcgaagatggttctcgcgtcagaccacccgagtccctccgc
gagagattggaacgattccgcaaagcggcgaatcgtatcgagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (134)   
   KEGG ORTHOLOGY (1)   
   RefGene (131)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (140)   

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