KEGG   Pirellula sp. SH-Sr6A: VN12_09030
Entry
VN12_09030        CDS       T04360                                 
Symbol
rsmE
Name
(GenBank) Ribosomal RNA small subunit methyltransferase E
  KO
K09761  16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Organism
pir  Pirellula sp. SH-Sr6A
Brite
KEGG Orthology (KO) [BR:pir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pir03009]
    VN12_09030 (rsmE)
Enzymes [BR:pir01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.193  16S rRNA (uracil1498-N3)-methyltransferase
     VN12_09030 (rsmE)
Ribosome biogenesis [BR:pir03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    VN12_09030 (rsmE)
SSDB
Motif
Pfam: Methyltrans_RNA PUA_4
Other DBs
NCBI-ProteinID: AMV32253
UniProt: A0A142XZ08
Position
2164401..2165165
AA seq 254 aa
MTIHRFFVDEIQSGGVQQVEGPEAHHALKVLRVRENDQVELFDGQGNVALAKVVALAKRD
FEVAIESRAFEPRDSDGRIHFAVCLPKGDRQRSVVEKLVELGVDSLIPLHSRFTVAEIDR
DNSERLERYALESCKQCQRNRRLAIRPPEKLANLEPIIRKLRDSGGSVWILHPGGHDAFQ
LQREPEGMRLASQQHLFLVGPEGGFGEDEVERCEKFGAIRLGLGSRILRVETAVAAAAVL
AQTFLHTPHSQVER
NT seq 765 nt   +upstreamnt  +downstreamnt
atgacgatccatcgcttcttcgtggatgaaatccaatcgggtggcgtgcaacaggtcgaa
ggccccgaagcgcatcacgcattgaaagtgcttcgagtgcgcgagaacgatcaggtcgaa
ctgtttgatggacaggggaacgtcgcgctggcaaaagttgttgccctcgcgaaacgtgac
ttcgaggtcgcgatcgagtcccgggcgtttgagcctcgcgacagcgacgggcgaatccat
ttcgctgtttgtttgcccaaaggggatcggcagcgaagcgttgtcgaaaagttggtggaa
ctgggagtcgattcgctgatcccactacatagtcgcttcaccgtggccgaaatagatcgc
gacaacagcgaacgactggaacgctacgcgttggaatcttgcaagcaatgccagcgcaac
cgaaggcttgctatacgacctccagaaaagctcgccaatctggaaccgatcattcgaaag
ttgcgtgactcgggaggatccgtctggattttacatccgggagggcacgatgcgttccaa
cttcagcgtgaacctgaaggcatgcgcttggcatctcaacagcacctgtttttagtcggc
cccgaaggaggctttggtgaggatgaagttgaacgatgcgaaaagttcggtgcgatccgc
ctgggactcggtagtcgcatcttgcgagtcgaaacagccgtcgcagccgcagccgtttta
gcgcagacatttctacataccccgcactcccaagtcgaaaggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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