KEGG   Pirellula sp. SH-Sr6A: VN12_11965
Entry
VN12_11965        CDS       T04360                                 
Symbol
rsgA
Name
(GenBank) Putative ribosome biogenesis GTPase RsgA
  KO
K06949  ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
Organism
pir  Pirellula sp. SH-Sr6A
Pathway
pir00730  Thiamine metabolism
pir01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pir00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    VN12_11965 (rsgA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pir03009]
    VN12_11965 (rsgA)
Enzymes [BR:pir01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.100  thiamine phosphate phosphatase
     VN12_11965 (rsgA)
Ribosome biogenesis [BR:pir03009]
 Prokaryotic type
  GTPases
   VN12_11965 (rsgA)
SSDB
Motif
Pfam: RsgA_GTPase MMR_HSR1 GTP_EFTU nSTAND1 AAA_16 ABC_tran AAA_23 AAA_29 AAA_15 AAA_22 MMR_HSR1_Xtn AAA_30 FeoB_N Ras SMC_N Roc AIG1 RsgA_N nSTAND3 AAA_21
Other DBs
NCBI-ProteinID: AMV32833
UniProt: A0A142Y0Q9
Position
complement(2897888..2899051)
AA seq 387 aa
MARKKSNKIRIEFRKKHQSQVRDADLTSQYEANLDEIDTISSERVSGKGELTRHRTVKGS
IEDTSRETLGNVELEVDRGTISGLVLRVHGLESIVKGGDGKIYRCSLRRVLKNLATDQRH
VLVAGDQVRIQREGGEQAWIVRIEPRRSTLSRTSKQRRHIIASNVDQLLIVTSASQPAIK
PNLIDRLLATAEQNHLEACICINKCDLIDVSKLQPLIGCYAQMGYQIALLSAAKGWGISA
LRTITKDRCSVVVGQSGVGKSSILNAIEPGLKQRVQAVSQENEKGKHTTTTAEVFPLSYG
GSLIDTPGVRQFQLWDIVASELTGLFRDIRPFASKCRYPDCSHIHENGCAVKDAVADGRL
DARRYDSYCQIIDSPYEGDRDELDGLE
NT seq 1164 nt   +upstreamnt  +downstreamnt
atggctcgcaagaaaagcaataagatacgaatcgagtttcgcaagaagcaccaatctcag
gtgcgcgacgccgatcttacgagccaatacgaagcaaatctggacgagatcgataccatt
tcgtccgagcgcgtaagcggaaaaggagagctgacgcgccaccgcacggtgaaaggaagc
atagaagacacatcgcgtgagacgctcggcaatgtggagttagaggtagatcgaggaacc
atctcagggcttgtgctgcgagtccacggcttggaatcgatcgtgaaaggtggggatggc
aagatttaccgatgctcgcttcgccgagtgttgaagaacttggcgacggaccaacgacat
gtcctggttgctggcgatcaagttcgaattcagcgagaggggggcgagcaagcctggatc
gttcgtattgaaccccgtcgaagcacattgagtagaacgagcaagcagcgaaggcacatc
atcgcttccaatgtcgatcaactgctcattgtcaccagcgcgtcgcaaccagccatcaag
cccaatcttatcgatcggcttctcgcgaccgcagagcagaaccatctcgaagcctgcatc
tgtatcaataaatgcgatttgatcgacgtttccaagcttcagcccttgatcggatgctat
gcgcaaatgggctatcaaatcgctctgctcagtgcagcgaagggttggggaatcagtgcc
ctgcgaacgattaccaaggaccggtgcagcgtcgtagtcgggcagagcggcgtcgggaaa
tcctctatcctcaacgcgatcgaacccggactgaaacaacgcgtacaagcggtcagtcaa
gagaatgaaaaaggaaaacacaccaccaccaccgcggaggtctttccgctttcctatggc
gggtcactcatcgatactccgggggtccgtcagtttcaactttgggacattgttgcgagc
gagttaacggggctctttcgcgacatacgcccctttgcgtcgaaatgtcgttaccccgat
tgcagccatatccacgaaaatggttgcgccgtgaaagatgccgtagcggatggcaggctc
gatgcgagacgctacgacagttattgtcagattatcgattcgccttatgaaggtgatcga
gacgagttggacggtttggaatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (38)   

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