KEGG   Prevotella intermedia: PIN17_A1469
Entry
PIN17_A1469       CDS       T02058                                 
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
pit  Prevotella intermedia
Brite
KEGG Orthology (KO) [BR:pit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pit03016]
    PIN17_A1469 (trmE)
Transfer RNA biogenesis [BR:pit03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    PIN17_A1469 (trmE)
 Prokaryotic type
   Methyltransferases
    PIN17_A1469 (trmE)
SSDB
Motif
Pfam: MnmE_helical TrmE_N MMR_HSR1 FeoB_N GTP_EFTU Dynamin_N RsgA_GTPase ABC_tran Roc Ras AIG1 cobW GCV_T Guanylate_kin AAA_21 MMR_HSR1_Xtn AAA_29
Other DBs
NCBI-ProteinID: AFJ08081
UniProt: A0AA85YWI3
Position
II:complement(1518456..1519859)
AA seq 467 aa
MQAYNNLLNSSETICALATQPGGAIGVIRVSGSKAIEIVDSIFSRPILNIPANTLHYGEI
LDKDHQTIDEVVVSIWRAPHSYTGEDLVEISCHGSAYILEQVLHRLIESNCRQAKPGEYT
QRAYLNGKMDLSQTEAVADLIASTNKASYKLALSQLKGHFSSELSTLRNQLLKINSLLEL
ELDFSDHEELEFADRTELIALSEEIDHKVTTLARSFKTGQALRNGIPVAIIGKTNVGKST
LLNCLLRDNRAIVSDIHGTTRDIIEDTISINGVDFHFIDTAGIRKTTDYVEQLGIERTLA
TLEKAQIVLWVVDNEPTESEKKEILAQCTDKHLILVHNKVDDLTEPTNQQNHAATSHDST
YTYHEIAISGKYNLGINQLESLIYKVADLPEITENTTIVTNARHYDALTRAHASLLRVQE
AMAMNLSGDLISEDLKDTISILAEITGDQITPQETLHNIFKHFCIGK
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgcaagcatacaacaaccttctcaactcttctgaaactatctgtgcattggcaacacag
ccaggtggcgcaataggtgtaatcagagtttcaggcagtaaagcaatcgaaatcgtggac
tccatattctcacgaccgattctgaacatccctgccaacaccttgcattatggagaaata
ctcgataaagaccaccaaaccattgatgaagtggtggtttcaatctggcgtgcacctcat
tcctacactggcgaagacttggtagaaatatcgtgccacggctcagcatacatcttagaa
caggtcttacatcgcttaatcgaaagtaactgccgccaagccaagcctggtgaatacact
caacgtgcctatctgaacggcaaaatggacttatcgcagaccgaagccgttgccgacctc
attgcctctaccaacaaggcgtcttacaaacttgccctttcacagctcaaagggcacttc
tcttcagagctttccacgctgcgcaaccagcttctcaagattaattcgcttctcgaactc
gaactcgacttctccgaccacgaagaattagagtttgccgaccgtaccgaattgattgcc
ctctctgaagaaatcgaccataaagtaacaactcttgcacgttcattcaagaccggacaa
gccctcagaaacggtattcctgtagccattataggcaaaacaaacgtagggaaatctacc
cttcttaactgcctcctccgtgataatcgcgccattgtaagcgatattcacggaactacc
cgcgatattatagaagacaccatcagtattaatggtgtagatttccactttatcgatact
gcaggcatacgcaaaactaccgactatgttgagcaattaggcatcgaacgcaccctcgcc
actctcgaaaaagcccaaatcgtgctatgggttgtagacaatgaacccaccgaaagcgag
aaaaaagaaatcctcgctcagtgtaccgataagcacttaattctcgtacacaacaaagta
gacgaccttactgagcctacaaatcaacagaaccacgctgcaacctcgcacgattcaact
tatacttatcacgaaattgccatatcaggcaaatacaacttgggtattaaccaacttgaa
tccctaatatataaggtagccgacttgcccgaaataacagaaaacaccactatcgttacc
aatgcacggcactacgatgccctcactcgtgcccacgcttcccttcttcgagtgcaagaa
gcaatggcaatgaatcttagtggcgaccttatttccgaagatttaaaagacactatctcc
atactcgccgaaattacaggcgaccaaattactccacaggaaacgctgcataacatattt
aaacatttttgcatcggaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system