KEGG   Peptoniphilus ivorii: NCTC13079_01224
Entry
NCTC13079_01224   CDS       T06636                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
piv  Peptoniphilus ivorii
Pathway
piv03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:piv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NCTC13079_01224 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:piv03021]
    NCTC13079_01224 (rpoA)
   03400 DNA repair and recombination proteins [BR:piv03400]
    NCTC13079_01224 (rpoA)
Enzymes [BR:piv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     NCTC13079_01224 (rpoA)
Transcription machinery [BR:piv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     NCTC13079_01224 (rpoA)
DNA repair and recombination proteins [BR:piv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      NCTC13079_01224 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5
Other DBs
NCBI-ProteinID: VEJ36031
UniProt: A0A448V2K1
Position
1:complement(1218156..1219103)
AA seq 315 aa
MIEIEKPSIVVERLDDDGNKGRFVVEPLENGYGITLGNSLRRVLLSSLPGCAVSFVNIRG
VEHEFSVIQGVLEDVPEIILNVKGIVLRSDQDEPVRLSVEKVGAGELTAADIEVPAGVEI
VNPDHHIATLNEDADLYMELVAERGRGYEPSELKKDEITEIGVIPVDSNYTPIRRVNWNV
ENTRVGLRTDYDRLILEVETDGSMSADAATSLAAKILTEHLDLFISMTETVNDVNIMVEK
PEDKKEKVLEMTVEELDLSVRSFNCLKRAGINTVEELTDKTEDEMMKVRNLGKKSLEEVQ
EKLSELGLSLKEDVE
NT seq 948 nt   +upstreamnt  +downstreamnt
atgatcgagatcgaaaagcctagtattgtagttgaacgattagacgacgacggcaataaa
ggaagatttgtcgtagaaccgctggaaaacggctatggaatcaccttgggcaattccctt
cggagagtcctgctctcctccctgccgggatgcgccgtgtcctttgtcaacattcgtggc
gtagagcacgaattcagcgtcatccagggcgtactggaagacgttccggaaatcatccta
aacgtcaaaggcatcgtgttgcgcagcgaccaggacgaacccgttcgtctgagcgtagaa
aaagtcggggcgggcgagttgaccgcggcggatatcgaagtgcccgccggggtagaaatc
gtcaatcccgaccatcatatcgcgaccttaaacgaagacgcggacctgtatatggaactc
gtcgcggaacgcggccgcggatacgagcccagcgaactgaaaaaagacgagatcaccgaa
atcggcgtgattcccgtcgattccaactacacccccattcgcagggtcaattggaacgta
gaaaacacgcgggtcggcctccgtaccgactacgatcgtctgatcctcgaagtcgaaacc
gacggatccatgtctgccgatgcggcgacgtctttggcggccaagatccttacggaacat
ctggacctgtttatctccatgaccgagaccgtaaacgacgtcaacatcatggtggaaaaa
ccggaagacaaaaaggaaaaggtcctggaaatgaccgtcgaggaactcgacctgtccgtt
cgcagcttcaactgcctgaaacgcgcgggcatcaacaccgtcgaagagctgacggataag
accgaagacgaaatgatgaaagttagaaatctcgggaagaagagcctggaagaagtgcag
gaaaagctgtctgaactgggtctctctctcaaagaagacgttgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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