KEGG   Paenibacillus sp. JDR-2: Pjdr2_0084
Entry
Pjdr2_0084        CDS       T00977                                 
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
pjd  Paenibacillus sp. JDR-2
Pathway
pjd00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:pjd00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Pjdr2_0084
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pjd01007]
    Pjdr2_0084
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pjd03016]
    Pjdr2_0084
Enzymes [BR:pjd01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     Pjdr2_0084
Amino acid related enzymes [BR:pjd01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   Pjdr2_0084
Transfer RNA biogenesis [BR:pjd03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    Pjdr2_0084
 Prokaryotic type
   Other AARSs
    Pjdr2_0084
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d CDC24_OB3 Methyltransf_23
Other DBs
NCBI-ProteinID: ACS98764
Position
87275..88792
AA seq 505 aa
MDQQNTGVEQEQELSELLQIRRDKLDELRALGVDPFGVKFERTHNAKDIVSAYEELSKEE
LEEKAIKVSVAGRIMQKRGMGKASFAHIQDLSGKIQIYVRKDTVEANKYAAFEMLDIGDI
VGITGVVFKTNTGEVSVKAYEVEVLTKSLLPLPDKYHGLKDVELRYRQRYVDLIVNPDVQ
QTFITRSRIIQSMRRYLDSKGYLEVETPTLHSIAGGAAARPFITHHNALDMQLYMRIAIE
LHLKRLIVGGLEKVYEIGRVYRNEGISTRHNPEFTMIELYEAYADYKDIMALTENLIAHI
AQEVLGTMKISYQGQEIDLTPQWRRVSMVDLVKEVTGVDFSVEMSDEEAHALAKVHKVPV
EPHMTFGHILNAFFETHCEHTLIQPTFVTGHPVAISPLAKKNPVDPRFTDRFELFVVARE
HANAFTELNDPIDQRQRFEAQLVEKEQGNDEAHEMDDDFIRALEYGMPPTGGLGIGVDRL
VMLLTDAPSIRDVLLFPHMRERAGE
NT seq 1518 nt   +upstreamnt  +downstreamnt
gtggatcagcaaaacacgggagtggaacaagaacaagaactaagcgaactactgcaaatc
cgcagagataaattggacgagctcagagcacttggcgttgacccgtttggcgtcaaattc
gagcgtacgcacaatgcgaaagacattgtgtccgcttatgaggagctcagcaaggaagag
ctggaagagaaagcaatcaaggtaagcgttgcgggccgcattatgcaaaagcgcggcatg
ggcaaagcttcttttgcgcatatccaggatctctccggcaaaatccagatctacgttcgt
aaagatacggttgaagcgaacaaatatgcggcatttgaaatgcttgatatcggcgatatc
gtcggcatcacaggcgtcgtgttcaagacgaacaccggcgaagtatcggtaaaagcttat
gaagtggaagtgctgacgaagtcgctgcttccgctgcctgataaatatcacggtctgaag
gacgtagagctgcgctaccgccagcgttatgtcgatctgatcgtgaacccggacgtacag
caaaccttcattacgcgttcccgcattattcaatcgatgcgtcgttacctcgactcgaag
ggctacctcgaagtggaaacgccaactctgcattccattgccggcggtgctgcggctcgt
ccgtttatcacccatcacaatgcgcttgatatgcagctgtacatgcgtatcgcgattgag
cttcacctgaaacgccttatcgtgggcggtctggagaaagtatacgagatcggccgcgtt
tatcggaacgaaggtatctccacgcgccataatccggagtttaccatgatcgagctgtat
gaggcatatgccgattacaaggatatcatggctctgacagagaacctgatcgcccatatc
gcgcaagaggttcttggcacgatgaaaatctcgtaccaaggtcaagagatcgacctgacg
ccgcaatggcgccgtgtttcgatggtggaccttgttaaagaggttaccggcgttgacttc
agcgtagagatgagcgatgaagaagctcatgccctcgcgaaggtgcataaagtgccggtt
gagcctcatatgacattcggccatatcctgaatgcgttcttcgaaacgcattgcgaacat
accttgattcagccgacattcgttacgggacatccggttgcgatctcgccgctggcgaag
aagaatccggtagatccgcgctttacggaccgcttcgagctgtttgtcgtagcgcgcgag
catgcgaacgcgttcaccgagctgaacgatccgatcgaccagcgtcagcgctttgaagct
cagcttgtcgagaaagaacaaggcaatgacgaagcgcatgagatggatgacgacttcatc
cgcgccctcgagtatggcatgccgccaacaggcggacttggcattggcgttgaccgcctt
gttatgctgcttaccgatgcgccttccatccgcgacgttctgttgttcccgcatatgcgc
gagcgtgcaggcgaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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