KEGG   Paenibacillus sp. JDR-2: Pjdr2_3768
Entry
Pjdr2_3768        CDS       T00977                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pjd  Paenibacillus sp. JDR-2
Pathway
pjd00300  Lysine biosynthesis
pjd00470  D-Amino acid metabolism
pjd01100  Metabolic pathways
pjd01110  Biosynthesis of secondary metabolites
pjd01120  Microbial metabolism in diverse environments
pjd01230  Biosynthesis of amino acids
Module
pjd_M00525  Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
pjd_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pjd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Pjdr2_3768
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Pjdr2_3768
Enzymes [BR:pjd01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     Pjdr2_3768
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: ACT02398
Position
complement(4306495..4307331)
AA seq 278 aa
MMKFTKMHGLGNDFIVIAGEQQLPGNVAELAKNQCNRFFGIGADGLVYILPSEVADFRMR
IINSDGSEAEQCGNAIRCAAKYIYDNGLTDKEELTIETLGAGAQTVQLEVADGKVQQVRV
DMGAPILNGLQVPTTVDEDRVIEHPIEVDGREFRFTAVSMGNPHCVIYVDDAANFDLATW
GPKLETHPMFPRKINVEFVTVISREHAEMRVWERGAGPTLACGTGACATVVSSVLNGLTD
RTAVVTLKGGDLTIEWNEADNHVYMTGPAAEVYRGEWK
NT seq 837 nt   +upstreamnt  +downstreamnt
atgatgaagtttacaaaaatgcatggtttggggaatgattttatcgttatcgccggcgag
cagcagctgccgggcaatgtagcggagctggcgaaaaaccagtgcaaccggttcttcggt
atcggcgctgacggactggtgtacatccttccttcggaagtggcggatttccgcatgcgc
atcatcaactccgacggttcggaggcggagcaatgcggcaacgcgattcgctgcgcggcg
aaatacatttacgataacggtcttacggataaagaggagttaacgatcgaaacgcttggc
gccggtgcgcagacggttcaactggaagtagcggacggcaaagttcagcaggttcgcgtt
gatatgggcgcgccgattctgaacggcctgcaagtgcctacaacggttgacgaagaccgc
gtaatcgagcatccgattgaagtggacggccgcgaattccggttcacggcggtatcgatg
ggcaaccctcattgcgtgatctatgtggacgatgccgctaactttgatcttgcaacttgg
ggacccaagctagagactcatccgatgttcccgcgcaaaatcaatgtggagttcgttacc
gtaatctcccgcgagcatgcggagatgcgcgtttgggagcgcggagccggaccaacgctg
gcttgcggcaccggcgcatgcgcaacggtcgtttcctccgtattgaacggcttaacggac
cgtactgcggttgtaacgcttaaaggcggagacctgacgattgaatggaacgaagcagat
aatcatgtttatatgactggacctgcagccgaagtataccgcggcgaatggaaatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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