KEGG   Pseudomonas knackmussii: PKB_1008
Entry
PKB_1008          CDS       T03081                                 
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
pkc  Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:pkc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pkc03400]
    PKB_1008 (sbcC)
DNA repair and recombination proteins [BR:pkc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PKB_1008 (sbcC)
    Archaeal homologous recombinant proteins
     PKB_1008 (sbcC)
SSDB
Motif
Pfam: SbcC_Walker_B SMC_N AAA_29 AAA_21 ABC_tran cobW nSTAND3 AAA_15 AAA_22 NTPase_1
Other DBs
NCBI-ProteinID: CDF82374
UniProt: A0A024HCP9
Position
1052727..1056167
AA seq 1146 aa
MRILSLRLKNLNSLKGEWKIDFSAEPFRDNGLFAITGPTGAGKTTLLDAICLALYHRTPR
MGALSKGSNELMTRHTADCLAEVEFEVKGLRYRAFWSQRRARDKVDGALQDAKVELARID
VTGGEGEIIADKVSEKLSQVEKLTGLDFGRFTKSMLLAQGGFAAFLEANANERAELLEEL
TGTEIYGLISQRVFERTREARASLDQLRARAEGMELLSAEQRAELEAEAERLLAEEQPLG
QRQQDLQVQRRWREDLTRAEQQREQALEREAQARLALENSSADLQRLAASEPAARLQPLH
QGWSQAQQRAAQAQGALEDIQRQQRDNAEKLIRSLWQASRHALQLREQRQGALEQLVEQR
RQVQQQLAEQPQRSRLGELLGGWKVQFELREQLRGEHAGAQSRLQEASRSIESLDAQLVA
QREVMATAEQQLNDARQAETQRQQALQVLLGEGGESGLREHWQRLQQQARTLDRLEQIAD
ARQQGAAQVARLQPQLDALQQRQQQKNGEIAALRERYKTLKQQVADKEKLLEQEQRIQAL
EAYRAQLQPGEACPLCGSHEHPAIASYQALDVSQTRRDLDECKSALAALEEQGKALAGEL
ARLEAQAEQARQQLDQSHQQQQQLDADWQRLLAEQALQIADVAALNAARQAQETALAQVQ
ERLAAVDAGKAELQRATAAREASERNHGSALQQQALLQRDLENARQRLAEQQHRLAQVQA
QEEQQAGVLLAALDGFADALPNDAASWLAAREQEWRDWQKLQQRDQQLQASESEARTALG
EAETQAAQWAARWQASGEQPLPEPAPADDPQQAMKAAASALAEAQRQADALGGREQSLQA
QLEQARTQLAEGEGAWQRALAESPFADRDTFLAALLDDAERGRLVDLKARLDTALTEAIA
LRAAAEESETRLRAEPRTELALAELDEQLKALAVQLRELGQRQGEVRAQLLGDDARRASQ
QALFAEIQAQEESHDLWQRLNGLIGSSDGAKYRRFAQGLTLDHLVHLANRQLQRLHGRYQ
LARRSDGELELEVVDTWQGDVARDCRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLD
EGFGTLDGETLEVALDALDSLNASGKSIGVISHVEALKERIPVQLKVHKGVGMGYSRLDA
RFAVKP
NT seq 3441 nt   +upstreamnt  +downstreamnt
atgcgcatcctcagcctgcgtctgaagaacctcaactcgctcaagggcgagtggaagatc
gacttttctgccgagccattccgcgacaacggcctgttcgccatcaccggccccaccggc
gccggcaagaccacactgctcgacgccatctgccttgcgctctaccaccgcacgccgcgg
atgggggctctttctaaaggctcgaatgagctgatgactcggcacactgcggactgccta
gccgaggttgagtttgaggtgaagggcctgcgctatcgcgcgttctggagccagcgtcgg
gcgcgcgacaaggtcgatggtgctctacaagatgccaaggttgagcttgcgcgcatcgat
gttactggaggtgagggagaaatcatcgctgacaaggtcagcgagaaattgagtcaagtc
gagaagcttaccggcctcgacttcggccgtttcaccaagtccatgctgctggcccagggc
ggcttcgccgccttcctcgaagccaacgccaacgagcgcgccgagttgctggaagaactc
accggcacggaaatctacgggctgatctcgcagcgcgtgttcgaacgcacccgcgaggcc
cgcgccagcctcgaccagctgcgcgcacgcgccgaaggcatggagctgctgagcgccgaa
cagcgcgccgagcttgaggccgaggccgagcggctgctggccgaggagcagcccctgggc
cagcgccagcaggacctgcaagttcaaaggcgctggcgcgaagacctgactcgcgccgag
cagcaacgcgagcaagcgctggagcgcgaggcccaggcacgcctggcattggaaaactcg
tccgccgacctgcaacgcctggccgccagcgagccggcggcgcgcctgcaaccgttgcac
cagggctggtcccaggcgcaacaacgcgctgcacaggcacaaggggcgctggaagatatc
cagcgccagcaacgggacaatgccgagaagcttatccgcagcctctggcaggccagccgc
catgccttgcaactccgcgagcagcggcagggcgcgttggagcagctggtcgagcagcgc
cggcaggtccagcagcaactggccgaacagccgcagcgttcgcgtctcggagaactgctg
ggcggttggaaagtgcagttcgagctgcgcgagcagctgcgcggtgagcacgccggcgcg
cagtcgcgcctgcaggaagccagccgcagcatcgagtccctcgacgcacagttggttgcg
cagcgcgaggtcatggccacggccgagcagcaactgaacgacgcacgccaggccgagacg
caacgccagcaggcgttgcaggtgctgctgggggagggcggcgagtccggcctgcgcgag
cattggcaacgtctgcaacagcaggcgcggaccctcgatcgcctggagcagatcgccgac
gctcgccagcagggcgccgcgcaggtcgcccgcctgcagccgcaactcgacgccttgcag
cagcgacagcagcagaagaacggcgaaatcgccgcgctgcgcgagcgctacaagacgctg
aagcagcaggtcgccgacaaggaaaaactgctcgaacaggagcagcgcatccaggccctg
gaggcctatcgcgcgcagctgcagccgggcgaagcctgcccgctgtgcggttcccacgag
cacccggccatcgccagctaccaggcgctggacgtctcgcagactcgccgcgatctggac
gaatgcaaatccgccctggccgcgctggaagagcagggcaaggcgctggccggtgagctc
gcgcgcctggaggcccaggccgaacaggcccgccagcagctcgaccagagtcaccagcaa
cagcagcaactcgatgccgattggcaacgtctgctcgccgagcaggccctgcagatcgcc
gacgtggccgcgctgaatgcggcacggcaggcacaggaaacggccctggcgcaggtccag
gaacggctcgccgctgtcgatgccggcaaggccgagctgcaacgcgcgactgctgctcgc
gaagccagcgagcgcaatcacggcagcgcgctccagcagcaggctctgttgcagcgcgat
ctggagaacgcccgtcagcgccttgccgagcaacaacatcgcctggcgcaggtgcaggcc
caggaagagcagcaggccggcgttctgctggccgcgctggacggctttgccgatgccttg
ccgaatgacgcggcaagctggctcgccgcgcgcgaacaggagtggcgcgactggcaaaaa
ctccagcagcgcgaccagcagttgcaggcgagcgagagcgaggcgcgcaccgcgctcggc
gaggccgaaacccaggccgcgcagtgggcggcacgttggcaggccagcggcgagcaaccg
ctgccggagccggcgcccgccgatgatccacagcaagcaatgaaagcagcggccagtgcc
ctggccgaggcccagcgccaggccgatgccctgggcggtcgcgagcagagcctgcaagcc
caactggagcaggcgcgtacccaactggcggaaggcgagggcgcctggcagcgtgccctg
gcggaaagccccttcgccgatcgggataccttcctggctgcgctgctggacgacgcagaa
cgtgggcgtctggtcgatctcaaggcgcgcctcgacactgcgctgaccgaagccatcgcc
ttgcgcgcggcggccgaggaaagcgagacacggctgcgcgccgagccgcgcaccgaactg
gcgttggccgagctggacgagcagctgaaggccctcgccgtacaacttcgcgaactcggc
cagcgccagggcgaagtgcgcgcgcaattactgggcgacgacgcgcggcgtgccagccag
caggcgctgttcgcggagatccaggcgcaggaggaaagccacgacctctggcagcgtctg
aacggtttgatcggctcgtccgatggcgccaagtaccggcgcttcgcccagggcctgacc
ctcgatcatctggtgcatctcgccaaccgacaattgcagcgcctgcacgggcgctatcaa
ctggcgcggcgcagcgacggcgagctggagctggaagtggtcgacacctggcagggcgac
gtcgcccgcgactgccgcacgctgtccggtggcgagagcttcctggtcagcctggcgctg
gccctggcgctgtccgacctggtcagccacaagaccagcatcgattcgctgttccttgac
gaaggcttcggcaccctcgacggcgagacgctggaagtcgcgctggatgccctcgacagc
ctcaacgcgagtggcaagagcatcggcgtgatcagccacgtcgaggcgctcaaggaacgc
atcccggtgcagctcaaggtgcacaagggcgtgggcatgggctacagccggctggatgcg
cgctttgcggtgaagccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

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