KEGG   Pseudomonas knackmussii: PKB_5171
Entry
PKB_5171          CDS       T03081                                 
Name
(GenBank) Putative fis-like DNA-binding protein
  KO
K03557  Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
pkc  Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:pkc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pkc03000]
    PKB_5171
   03036 Chromosome and associated proteins [BR:pkc03036]
    PKB_5171
   03400 DNA repair and recombination proteins [BR:pkc03400]
    PKB_5171
Transcription factors [BR:pkc03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    PKB_5171
Chromosome and associated proteins [BR:pkc03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    PKB_5171
DNA repair and recombination proteins [BR:pkc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      PKB_5171
SSDB
Motif
Pfam: HTH_8 HTH_30 RBD UPF0175 Xre-like-HTH
Other DBs
NCBI-ProteinID: CDF86484
UniProt: A0A024HPB8
Position
5429699..5430019
AA seq 106 aa
MTTMTETLVSGMTPVSDNANLKQHLTTPTQEGQTLRDSVEKALHNYFAHLEGQPVTDVYN
MVLCEVEAPLLETVMNYVKGNQTKASELLGLNRGTLRKKLKQYDLL
NT seq 321 nt   +upstreamnt  +downstreamnt
atgacaacgatgaccgagacattagtgagtggaatgacacccgtgagcgacaacgcgaac
ctcaaacagcacctgaccacaccgacgcaggaagggcagaccctccgcgacagcgtggaa
aaggcactgcacaactattttgcccatctcgaagggcagccggtcacggacgtatacaac
atggtgctctgcgaagtggaagcaccgctgctggaaaccgtcatgaattacgtgaagggt
aaccagaccaaggcctccgagctgctcggcctgaaccgcggcacgctgcgcaagaaactc
aagcaatacgatctgctctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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