KEGG   Paramormyrops kingsleyae: 111859635
Entry
111859635         CDS       T05788                                 
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
pki  Paramormyrops kingsleyae
Pathway
pki03013  Nucleocytoplasmic transport
pki03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pki00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111859635 (srrm1)
   03015 mRNA surveillance pathway
    111859635 (srrm1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pki03019]
    111859635 (srrm1)
   03041 Spliceosome [BR:pki03041]
    111859635 (srrm1)
Messenger RNA biogenesis [BR:pki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     111859635 (srrm1)
Spliceosome [BR:pki03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    111859635 (srrm1)
SSDB
Motif
Pfam: PWI
Other DBs
NCBI-GeneID: 111859635
NCBI-ProteinID: XP_023698242
Ensembl: ENSPKIG00000008252
Position
Unknown
AA seq 875 aa
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKNPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKMDDEKDIKDNREKDQSKSPRRRKSRSPSPRRRSP
AKRDRKRSHSRSPRRKPSPAPGPGASPLSQLRNPEQAPPEPDQSECAKPKLLIQEASSTS
DLVKEVKPDSVAEAREPSPDKSSRREEKARPRDREKEARRDRPRSRSRSRRRPRSRSRSY
SPRRRQSPRRRTSPRRRSPPRRAPPAPRHRRSRSPARRRRSPSPSSSGSSSSSSSSRSPQ
KKVLKRVSNTPPRKPRGAPASPARRRGRTPPSGASPPPKGRRSASPRTRRGRASVSPSRS
SGSKRKAGVKNESPSPAPKPRRSDPSESEDDKGGKGATADSVQQRRQYRRQNQQSSSDTG
SSSSSEDEGPKRQSAGPTPAARNGEIKRRRTASPASPRRRHRDASPRRRRTPSPPGRRHR
SPSPPRRRRSASPPPRRRYVPHLSFVCVQLLFQRLIYAAXXXXXXXXXXXXXXXXXXXXP
PRRRSPSPRRYSPPIQRRFSPSPLPPPKRRASPSPAPKRRTSRSPKHRGSPAPKRRGTPP
LSASPPCHRRSPLLPPGRPARDARSPAPPGSPPQPQRRHSPSPSQRPIRRVSRTPEPKKV
KRTSPSPQPVRRMPSRSPSASPEPAIRKRPAAPSPAPSPSPSRSASASPPPPAAKAHSGS
ASPSPAKNSDVEAGGKKKKKKKEKKHKKEKKHKKHKKHKKERGPGGPDNAGPDGDSDPRK
DSDSEVEESLDELERHLREKALRSMRKAHMSPAES
NT seq 2628 nt   +upstreamnt  +downstreamnt
atggacgcgggctttttccgcggcacgagcgcagagcaggataatcgcttcagcaacaag
cagaagaagctcctgaagcagctgaagttcgcagaatgcctggagaagaaggtggacatg
accaaggtgaacctggaggttatcaaaccctggatcacccagcgagtgacagagatttta
gggttcgaggatgacgtcgtcatagagtttattttcaaccagctggaggagaagaatcca
gacagcaaaatgatgcagatcaacctgactggcttcctgaacgggaagaatgcgcgtgag
tttatgcgtgacctttggcccctgttgctcagcgcccaggaaaacattgctggcatcccc
tctgctttcctggaacaaaagaaggaggagatcaaacagaggcagattgagcaggagaag
ctggcctctctgaagaagatggatgacgaaaaggatattaaggacaaccgggagaaggac
cagtccaaaagcccgaggaggaggaagtccaggtccccgtcgcctcggagacgctcccca
gccaagcgggaccggaagcgaagtcactcacgctcgccgcggcgcaaacccagcccggct
cccgggcccggggcgtctcctctcagccagcttcgcaacccagagcaggccccgcccgag
ccggaccagtccgagtgtgccaagcccaaacttctcatccaggaggcctcctccaccagc
gacctggtgaaggaggtgaagccagactccgtagcagaagccagggaaccttccccagac
aagtcctcgcgcagggaggagaaggccaggccgcgggacagggagaaggaggcccggcgt
gacaggccccggtctcgctcgcgctcccgcaggaggccccgctcgcgctccaggtcctat
tccccccgtaggagacagagtccccgcaggcgcacatcgccgcgccgccggagccccccc
agacgggccccccccgcacccagacaccggcggagccgttccccagcccgccgcaggcgc
tccccatccccctcttcatctggcagcagctcttcatcctcttcctcacggtctccccaa
aagaaagtcctaaagcgtgtgtccaacacacccccccggaagcctcgtggagcccccgcc
agtcccgccaggaggcgcggccgcacgccaccatctggagccagccccccgcccaagggt
cgccggtctgcctctccccggacccggcgaggcagagcctcagtatccccctccaggtcc
tcggggtctaaacggaaagcaggtgtgaagaacgagtccccgtctccagctccaaaaccc
cgacgatcggatccctcagagtcagaggatgataaaggtgggaagggggctacagcagat
tctgtgcagcagcgacgtcagtatcgcaggcagaatcagcagtcttcctcagacactggg
tcctcctcatcctctgaggatgaagggccaaagaggcagagcgcaggccctacacccgct
gccaggaatggcgagattaagaggcgccgcacagcctccccagcctcgccccgccgccgg
cacagggacgcctcccccaggaggagacgcacgccttccccgccgggccgccgtcaccgc
tcaccctcccccccgcggaggaggcgctccgcctccccacccccccgccgcaggtacgtc
cctcatctttcctttgtttgcgttcagctgctcttccagcgcctcatatatgctgctnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncct
ccacgcaggcgctctccgtctccacggcgttactccccccccatccagaggcgcttcagc
ccatctccactgcccccccctaagcggagggcctcgccttctccggcacccaagcgtcgc
acgtccaggtcccctaaacaccgaggttcacccgccccaaagcgccgaggcaccccgcct
ttgtcggcctcgccaccctgccaccgccgcagccccctgctgcccccagggaggccggcc
agggatgcccgttcccctgcaccgccgggctcacccccacagccacagcggcgccattcc
ccgtcgccgagtcagaggcccatccgccgtgtgtcccgcacccccgagcccaagaaggtc
aagaggacttctccgagcccccagcctgtaaggcggatgccatctcggtccccgtcagcc
tccccagagccggcgatcaggaagcgtcctgcggcgccttccccggccccctcgccgtca
ccctcgcgctctgccagcgcctcccccccacccccggcagccaaggcccacagcggctcc
gccagcccttctcctgccaagaactcggacgttgaggccggaggcaagaagaagaagaag
aagaaggagaagaagcacaagaaggagaagaagcacaagaagcataagaaacacaagaag
gagcggggccctgggggcccggacaatgcggggcccgacggtgactccgatcccagaaag
gattcagacagtgaagtagaggagagcttggatgagctggagagacacctgagggagaag
gcgctgcgctccatgaggaaggcccacatgtccccagcggagtcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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