KEGG   Pseudomonas koreensis: AYO71_05340
Entry
AYO71_05340       CDS       T04647                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pkr  Pseudomonas koreensis
Brite
KEGG Orthology (KO) [BR:pkr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pkr03019]
    AYO71_05340
   03009 Ribosome biogenesis [BR:pkr03009]
    AYO71_05340
Messenger RNA biogenesis [BR:pkr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AYO71_05340
Ribosome biogenesis [BR:pkr03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    AYO71_05340
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: AMT86988
Position
1208217..1208759
AA seq 180 aa
MQNPQNLIWIDLEMTGLDPDNDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGNSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFLYTHMK
ALESYFHYRNLDVSTLKELAARWAPDVRDSFKKGSTHLALDDIRESIAELQHYRKHFIKF
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcaaaatccgcagaacctgatctggatcgacctggaaatgaccggtctggacccggac
aacgatgtcatcatcgaaatggccactatcgttaccgacagtgagctgaacacattggct
gaaggtccggtgattgccatccaccatagcgacgaagtgctcgcgcgcatggacgagtgg
aatacccgcacccacggcaactccggtctgacccagcgtgtgcgcgacagccgcatcagc
atggctgaggcagaagctgagaccatcgcctttctggaaaagtgggtgccgaagggcaag
tcgccgatctgcggcaatagcatctgccaggatcgtcgcttcctttatacccacatgaag
gcgctggaaagctacttccactatcgcaacctcgacgtctccacgctcaaggaactggcc
gcgcgctgggctccggatgtgcgcgacagcttcaagaagggcagcacccacctggcgctg
gatgacatccgcgaatcgatcgccgagctgcagcactaccgcaagcatttcatcaaattc
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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