KEGG   Pseudomonas koreensis: AYO71_16300
Entry
AYO71_16300       CDS       T04647                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
pkr  Pseudomonas koreensis
Pathway
pkr03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pkr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    AYO71_16300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pkr03400]
    AYO71_16300
DNA repair and recombination proteins [BR:pkr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     AYO71_16300
SSDB
Motif
Pfam: Ku DDRGK GLD3_KH3
Other DBs
NCBI-ProteinID: AMT89024
Position
complement(3639916..3640782)
AA seq 288 aa
MARAIWKGAISFGLVHIPVALVSATSSQGVDFDWLDSRSMDPVGYKRINKVTGKEVTKEN
IVKGVAYEKGRYVVLSEEEIRSAHPVSTQTIDIFSFVDAEQIPLQNIDTPYYLAPDKRGG
KVYALLRETLSKTNKVALARVVLHTRQYLAALMPLESALVLVKLRWPQEVRSLDELALGS
EVTKPQLAKGELDMAKRLVEDMTSEWSPEDYKDEFEDKIMALVEKKAHEGKIEDVETTTG
EEERKSADVIDLTELLKRSLGGKAPAKPKAKSTSKAAPAKKTRKASGE
NT seq 867 nt   +upstreamnt  +downstreamnt
atggctcgggcaatctggaaaggcgcaatcagttttggactggtacacatccccgtggcg
ctggtttcagcgacgtcgtcccaaggcgtggacttcgactggctcgacagccgcagcatg
gacccggtgggctacaaacgcatcaacaaggtcaccggcaaggaagtcaccaaagaaaac
atcgtcaaaggcgtggcctacgaaaagggccgctacgtggtgctcagcgaggaagaaatc
cgctcggcgcaccccgtctcgacgcagaccatcgacattttctcgttcgtcgatgccgag
cagattccactgcagaacatcgatacgccctactatttggcgccagacaagcgcggcggt
aaggtctacgcgttgctgcgcgaaaccctgagcaaaaccaacaaggtcgccctcgcccgc
gtcgtcttgcacacgcgccaatatctggccgcgctgatgccgctggagtcggcgctggtt
ctggtgaaactgcgctggccacaggaagtgcgcagcctcgatgagctggcgctgggcagc
gaagtgaccaaaccgcaactggccaagggtgaactggacatggctaaacgtctggtcgaa
gacatgacctcggagtggtcgcctgaggactacaaggacgagttcgaagacaagatcatg
gcgctggtcgagaaaaaagcccacgaaggcaagatcgaggacgtcgagaccaccactggc
gaggaagaacgcaagagtgccgatgttatcgacttgaccgaactgcttaaacgcagcctc
ggcggcaaggcaccggccaagcccaaggccaaatcaaccagtaaggcggcgccggcgaag
aagaccaggaaggcgtccggggagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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