KEGG   Paucibacter sp. KCTC 42545: AT984_01685
Entry
AT984_01685       CDS       T04227                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pkt  Paucibacter sp. KCTC 42545
Pathway
pkt03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pkt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AT984_01685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pkt03400]
    AT984_01685
Enzymes [BR:pkt01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     AT984_01685
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AT984_01685
DNA repair and recombination proteins [BR:pkt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AT984_01685
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS DUF2835
Other DBs
NCBI-ProteinID: ALT76109
UniProt: A0A0U3F6A6
Position
378139..378978
AA seq 279 aa
MPELPEVEVTRRSFAQAIEGATVTRVALGKALRWPLGLAPDSLVGGRVGAVTRRGKYLWL
PISEPVAEGGLLLHLGMSGSLAFSAAPQSTPSAPGPHDHFDLYTDRGLLRLNDPRRFGAV
VWSPAFDQPPAAKLLAGLGLEPFDPRFTGEYLRAGLSGRRVAVKSALLAGDIVVGAGNIY
ACESLFLAGIDPRLAASKVSRPRAERLAQAVRGVLAQALEAGGTTLRDFKDAHGVAGSFQ
MQASVYGREGLPCLRCDTPVRRIVQGQRSTFFCPKCQKK
NT seq 840 nt   +upstreamnt  +downstreamnt
atgcccgagctccccgaagtcgaagtcacccgccgcagctttgcgcaagccattgaaggc
gctacggtgacccgcgtggccctgggtaaagcgctgcgctggccgctggggctggcgccc
gatagcttggtgggcggccgtgttggcgccgtgacccgccgaggtaaatatttgtggctg
ccgatatccgagccggtggccgagggcggcttgctgctgcacctgggcatgtcgggctcg
ctggccttcagcgccgcgccgcaaagtacgccaagcgcacccggcccgcatgaccatttc
gacctctacaccgaccgtggcttgctgcgtctgaatgatccgcgtcgctttggcgccgtg
gtctggtcgcctgcctttgatcaacccccggccgctaagctgttggccggcctgggcctt
gagccttttgacccgcgcttcaccggtgagtacctgcgcgcgggcttgagcgggcgccgg
gtggcggtgaagtcggccctgctggcgggcgatatcgttgtgggcgccggcaatatctac
gcttgcgaatccctgtttttggccggcattgaccctcggctggccgcatccaaagtcagc
cggccgcgggccgagcgcttggcgcaggctgtgcgcggcgtgctggcccaggcgctggag
gccggcggtaccaccttgcgcgacttcaaagatgcgcacggcgtggccggcagttttcaa
atgcaggccagcgtctatggccgcgaaggcctgccctgcttgcgctgcgacaccccggtg
cgccgcatcgtgcagggccagcgctccacctttttctgccccaaatgccaaaagaagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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