KEGG   Pichia kudriavzevii: C5L36_0A08770
Entry
C5L36_0A08770     CDS       T06133                                 
Name
(RefSeq) uncharacterized protein
  KO
K12604  CCR4-NOT transcription complex subunit 1
Organism
pkz  Pichia kudriavzevii
Pathway
pkz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pkz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C5L36_0A08770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pkz03019]
    C5L36_0A08770
Messenger RNA biogenesis [BR:pkz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     C5L36_0A08770
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     C5L36_0A08770
SSDB
Motif
Pfam: Not1 CNOT1_CAF1_bind CNOT1_TTP_bind DUF3819 CNOT1_HEAT_N CNOT1_HEAT
Other DBs
NCBI-GeneID: 40381992
NCBI-ProteinID: XP_029319759
Position
1:complement(join(1936459..1943322,1943677..1943694))
AA seq 2293 aa
METNFTASSPILNNIQSIASSPLSKDLNRAIISQLSILITNLNSSNYTEVSSKIDSILNK
YQEAIPTFLRRLINQSSAEILESESYKSSNSYNLKVLRNQLKRLTSTDLNKVKFISEALL
TPESQFVLFSLEKFLAFFELSNSESLLISLSIEEFIVNHNLKEKNSSLLKELPDLYIKYS
AGFIEWLSLLESTNTTSKVDLLTFLKLFLNSEIFSVPHKFIVLTQISKTFKSDNTPSHKA
NTKLPFQTNFDKLNTIINKFLDKVRKMSIEKLVLEFCNTKSSPERLLTDLLSIQPEENID
APVWILLSETLLPGFYSKKVNNNEHTSSNASDENTLSLLTADTLPEATARGSRMLQVINK
FKDLVNWDVVFTNIISNWDQGFTISAISLSQFLSSINSDKLIDQFLMKVCESSKIPILSQ
LLIQLNSLDPNVGAIDIFRLNLKPILETETNSRNLLLYYKSITMLEVKTVSLLSFKKIND
NIVSQIFNKDLRIAPEYMILACLHLQHRFPKAEENDIIVNIMQNFFINLLDANSPYLTAV
FALFEELNGKELGRLLLKYLELRKNPENIHKVASLTASFKDDTVVQSILSSCTDFHESFT
IAVVFSQYGWKHFKQFILDKLEVDHLSVLTTILNYLETQARIEYENTQQGKKDIRSLNIE
TIYFLMTALSTEKLPKELFERTRNLQTLCLQAYPRLINFGQGHDSAIMMNGDSNSFSIEV
EKEMKLYYQRMYKKEIEIKDVVLILQKLKNSDNPYEQDVFACMIHSLLDEYRFFPEYPVD
ALATTSVLFGNAIVSKLLEGPALSIALRYILESAREPMQSKMFKFAVQALYSFMKRLPEF
PKFCSILCEIESLKYHTDLYELCKLISSGKPLPPGFNDEPVSEDQGLKNNMLEEDVEIVS
KYASITIPDISYNVVVQEVPPQEVSDRILFMVNNVSENNLTSRIDEMKGLLTPNHHKWFA
KYLVNQRAKLELNNQHIYATIVGGLKSQNLYSYVVIVTIRQITILLNKTVGDSNQGLTSS
EKNHLKNLGSWLGRISLANDHPILRKDISFKNLLVEGYHQRSLEYVTPLVCKVLDHAKSS
KVFCYPNPWLLGILQVLKELYEIADLKLTLKFEIEVLCNELNIKLDHIESSHTIRNSKPE
DIESLIHSQKLISNMTVMALNPKRGIPAITPTFELSSLNGSNSLLLLQQQQQQQQQQLAL
LQQLQQQRLLARSGIQNSPVVSNLTPLSQQTILQQQAQAQTQQQSQQVQQPSQQVQAFDN
LLGETVFVTHPALKRIFQLSLAKAVKDLLPPLVHRTNTVCVVTTKALIQKDFAFEVDETK
FRKAYINTIRHFADHLIIASSADLVRDTIQSNIHQYLQVYVNDAAFAEQIPIAVNDNLNL
ALSIIQKATIEKAVSDMDEAMLPALALRRQFSITSPNQLFCDTQNASKYAMSLPEPLGIK
PGGVNAEQFRIYEEFGKGDNRLIDASLPRAEGVLNPAEVFEGDSKEKLLQKQLLLQQQQQ
LQQQQLQQQLQQQQLEQMRSVQPQLPPNVLEQSIAFINQHFETIIKATQELSDKDLKLSS
DTSEIEPIKNMLMEIVQTLTRLSQQKLYLEYAQMSINTLFSVKEPSQLFVDVFVFLIGSI
CDSSPFVVRFISTWLFHSADERKLNPKILKTFILEGFISLSDISYAICKHIEVTKDSKWI
SAACDIISDFVFGAEPIALRSDFIQIISLLERSDDTIKNSEKVQSLFKKLESSGDDAIKK
LKNGLLATSNLKEYIAYMFSEWTKIYKFSGESKLQLAFMSQLVDSGIFNTPDLFAQFFTV
ATEVCVDAFVKETDNLKRASIDSYTAVDSLAKLVIILLSIQSDETEDNKKRIEFFTRFCS
VFILAFSNDHEINKASFNERPYFRFFSTLLSELSLLKNKRFKPYAIGEADEKKFNCMFKE
LYKVLADILLCLQPTAFPGFTYAWICLISHRMFMPMILELGETDSECSEKFCSLLVALLR
FESGFVKGSIIPDSVNVIYKGTIRVFTVLLHDFPEFLAQWFNPLLSATSFTFIQLRNIIS
SAVPFDIKVPDPFQPGLKVDRLPETYIAPVIGSDPSQPLLKKNCKKTLDNYLRIPSNSLL
RQLLLVLELNEPVSEGGIGFRKIRYDIPLINSLVLYTCISYVEERSRNNFTFNPHSSQVS
LLVSLMQEGDVELQFLILQAIANNLRYPNSHTHWFSCVVLHFFSSKNLWGEKKEDIQQLI
TRVLLEKIICNKPHPWGLLVTFIELLKNKDYDFSNLSFTKITPAVGNVLGALISHANSSN
TAVYSDQDVSANS
NT seq 6882 nt   +upstreamnt  +downstreamnt
atggaaactaactttacagcgagttcgcctattctaaacaacatccaatcaatcgcatca
tctccattgtcaaaagatcttaatagggctataatttctcaattgtccatactaattaca
aatttaaatagctctaattatactgaagtcagttccaagatcgactccattttaaataaa
tatcaagaggctatacctactttcctaagaagattaatcaatcaatcatctgcagaaatc
ctagaatcagaatcatataaaagttccaattcttataatctaaaagtcttacgtaaccag
ttaaaaagactcacatctacagatttaaataaagtgaaatttatttccgaagctttattg
accccagaatctcaatttgttttattttcattagagaagtttttagccttttttgaatta
tcaaattcggaatccttattgatttctttatcgattgaagaattcattgttaatcacaac
ttaaaggagaaaaacagttcattattaaaggagttacctgatctttatatcaaatattca
gcgggctttattgagtggttaagtttactagaaagcacaaataccacatcaaaggttgac
ttattaacttttctgaaattattcctaaattctgaaattttctcagttcctcataagttt
atagttttaactcagatttccaagaccttcaaatctgacaacactccaagtcacaaagca
aacacaaaacttccatttcaaacaaactttgataaactcaacaccataatcaacaaattt
ttagacaaagtgagaaaaatgagcatcgaaaaactagtcttggaattttgtaatacaaag
tcctcacctgaaagattattaaccgatctgctatccattcagccggaggagaatattgat
gcaccggtttggattctattatccgaaaccttattacccggtttttactcaaagaaagtt
aacaataacgagcacaccagcagtaatgcatctgatgaaaacacactgtctcttttaact
gcagatactttaccagaggctactgctagaggctcgaggatgttacaagtaataaataaa
tttaaagatttggttaactgggatgttgtcttcactaatatcatatccaactgggatcaa
ggatttaccatatcagcaatatcgctatcgcaatttctgtcatccattaattccgacaag
ttgatagaccagttcctaatgaaggtttgtgaatcctctaaaattccaattttatcacaa
ttactaattcaattgaatagcttagacccaaatgttggtgctattgatatcttcaggttg
aatttaaagcctatccttgagaccgaaaccaattctagaaatcttctattgtactacaaa
tcaataacgatgttggaagtaaaaacagtttctttgttgagtttcaagaagatcaatgat
aatatcgtatctcaaattttcaacaaagatttaagaattgcacccgaatacatgatatta
gcttgcttgcatttgcagcatcgattcccaaaagcagaggaaaatgatatcattgtcaat
atcatgcagaactttttcatcaatttacttgatgctaactctccctatcttactgccgtt
tttgcattattcgaagaattaaatggcaaagaacttggaaggttactattaaaatactta
gagcttaggaagaaccctgagaatattcataaggttgcaagcttaacggcctcatttaaa
gatgacactgttgtccaatcaatattatcaagctgtactgacttccacgaaagttttaca
attgcagttgttttctcacaatatggttggaaacatttcaagcaatttattttagacaag
ttggaggtcgatcatttatcagttttaacaacaatcttgaattatctagaaactcaggct
agaattgaatatgaaaacacgcagcagggaaaaaaagacatcagatccttaaatattgaa
accatttatttcttaatgactgctctgtcaaccgaaaaactgcctaaggagttatttgag
cggactagaaacttacagactttatgtctacaagcttatcctaggttgattaatttcgga
caagggcacgattcagcaattatgatgaatggcgatagtaactcattctctattgaagtt
gaaaaggagatgaaattgtattatcagaggatgtacaagaaagaaatagaaattaaggat
gtcgttttgattttacaaaaactgaagaattctgataatccatatgaacaagatgtcttt
gcatgcatgatacattccctactagatgaatacagatttttcccagaatacccggttgac
gccttggccactacctcggttttatttggtaatgccattgtttcaaaacttttagaaggt
ccggccctctctattgcgttgcgctacatactagaatcagctagagaacctatgcaatcc
aaaatgtttaagtttgctgttcaagcgttatattcatttatgaagagattgccagagttt
ccaaagttctgctcaatactatgtgagattgaatctttaaaatatcacaccgacctatat
gaactttgcaaactaatctctagtggtaaacccttaccacctggtttcaatgacgaacct
gtttctgaagaccaggggttgaaaaacaacatgttggaagaagatgtcgaaatagtctct
aaatacgcttcgattactattcccgatatatcgtataacgttgtggttcaagaggtccca
ccacaagaagtttcggatagaattttatttatggttaataatgtcagtgagaataactta
acttcaagaattgatgaaatgaagggcttgttaacgccaaatcatcataaatggtttgcc
aaatatctagtcaatcaaagggctaaattagagttaaacaatcaacatatttatgccact
attgttggaggcttgaaatcacaaaacttatacagttatgttgttattgtcacgatcaga
caaatcactatcttattgaataaaaccgttggtgactccaatcaggggttgacttcatcc
gagaaaaatcacttgaaaaacttaggttcttggttaggtagaatttcgttagccaatgat
catccaattctaagaaaagacatctctttcaaaaacttgctagttgaaggttaccatcaa
agaagcctggagtatgttacccctttggtctgtaaagttttagatcatgcaaaatcctct
aaagtcttttgttatccaaacccttggttattaggtattcttcaagttctaaaggaactc
tatgagattgctgacttaaagttgacactcaaatttgagattgaggttttatgcaacgaa
ttgaatattaaattggaccatattgaatcctcacatactataagaaactccaaacctgag
gatatcgagtcactgattcattcacaaaagcttatttcgaatatgacagtcatggcgctc
aacccgaagaggggaatacctgcgataacaccaacttttgagttgtctagcttaaatggt
agtaactctctactactattacaacaacaacaacagcagcagcagcagcaattggctctc
cttcaacagctgcaacagcagaggctactagcacgttctggtattcaaaattctcctgtt
gtttcgaatcttactcctttaagccagcagactattttgcagcaacaagcccaagctcaa
acccagcaacagtctcaacaagtacaacaaccgtcgcagcaagtgcaagcctttgataat
cttttgggcgagactgtttttgttacacaccctgcattaaaacgtatcttccaactgtct
cttgcgaaagcggttaaagatttgttaccaccattagttcatagaacaaacactgtttgt
gtggttaccacaaaagcgcttattcaaaaagattttgcctttgaagttgacgaaacaaaa
tttagaaaagcttatatcaataccatcaggcattttgcggatcatcttattattgcatca
tctgctgatctagttcgggatactattcaatcgaacatacatcaatacttacaagtttac
gttaacgatgcagcttttgcagaacaaattccaattgcagttaacgataatctgaatttg
gcattgtcaattattcaaaaagcaactattgaaaaggctgtaagtgatatggatgaagct
atgctgcctgctttggcattgcgtagacaattttccatcacttcacctaatcaactgttc
tgtgatactcaaaatgcttccaaatatgcaatgtctttaccagagccattaggtattaag
ccgggtggtgttaacgctgaacaattccgtatttatgaggaatttggtaaaggtgacaat
cgtctaattgatgctagtttgcctagagcggaaggagtcctaaaccctgctgaagtattt
gaaggcgactcaaaggaaaaattgcttcaaaagcagttattgttgcaacagcagcagcag
cttcaacaacaacagctccaacagcaattacaacaacaacaattagaacaaatgagaagt
gtacaacctcaattacctcctaacgttctagaacaatccatcgcatttattaatcaacat
tttgaaacaatcatcaaggcgactcaagagctttcagataaggatctcaagttatctagt
gatacatctgaaatcgagccaattaagaatatgctaatggaaattgtgcaaactttgaca
aggttgtctcaacaaaaactgtatttagagtacgcacaaatgtcgatcaacactttattc
agcgttaaggaaccctctcagttgtttgttgatgtttttgtctttttgattggtagtatt
tgtgattcttcgccttttgttgttagatttattagcacctggttgtttcattccgcggat
gaacggaaactaaatccaaagatcttgaaaacctttattctggaaggattcatatcactt
agtgacatttcatatgcaatttgtaaacatattgaagtgaccaaagattccaagtggata
tctgcagcttgtgatatcatttcggactttgtgtttggtgcagaacctattgcgttaagg
tcagattttattcagatcatctcgttacttgagcgctctgatgataccataaagaattcc
gaaaaagttcagtcacttttcaagaaattggaatcttcaggtgacgatgctattaagaaa
ttaaaaaatggtttacttgccacttcgaatttgaaggaatatattgcatatatgttttct
gagtggactaaaatttacaagttttctggtgaatccaaattacagcttgcattcatgtct
caactagtcgattcgggcatttttaatactccagatttatttgctcagttttttacagtt
gcaacggaggtttgtgttgatgcatttgttaaggagactgacaatttaaagagggcatcc
atcgactcatacactgcagttgactctttggcaaaacttgtgataattttattgtcgata
caaagtgacgaaactgaggataataagaaaaggatcgaattttttacgagattctgctct
gtttttattttggctttctcaaatgatcatgaaatcaacaaagcatccttcaatgaaagg
ccatatttccggtttttttctaccttgctatcagaattgtcgcttttgaagaataaaagg
ttcaagccgtatgcaattggtgaagctgatgagaagaagttcaattgtatgttcaaagaa
ttgtataaggttttggctgatattcttttgtgtttacaacctactgcttttccaggtttt
acctatgcatggatatgcttgatttctcatcgtatgtttatgccaatgattctagaactt
ggtgaaactgatagtgaatgttctgaaaagttttgttcattgttagttgctttattgaga
tttgaaagtggatttgtgaaaggaagtattataccggactctgttaacgtcatctacaag
ggtaccattagagttttcacggttctactacatgatttccccgaatttttggctcagtgg
tttaatccactattaagtgctacttcgtttacttttattcaattaaggaatattatttca
tcagcggttccatttgacatcaaagtacctgacccatttcaaccaggattgaaggttgat
agattgccagaaacttatatcgcgcctgttattggatctgacccaagtcagccattgctg
aagaagaattgcaagaagactcttgacaattacctaaggatcccctcaaactccttacta
agacaacttttgcttgttttagaactaaatgagcctgtgagtgaaggtggaattggcttc
aggaaaatcagatatgatattccgttgatcaactccttagttctttacacatgcatctct
tatgttgaagaaagaagtcggaataattttactttcaacccacattcttcgcaagtctct
ttgctagtttccttgatgcaagaaggcgatgtcgagctacagtttttgattttgcaagca
attgctaacaatttaagatatccgaattcgcacacacactggtttagctgtgttgttttg
catttcttcagctcaaagaatttatggggagagaagaaagaagatattcaacaattaatc
actagagttttattagagaagattatttgtaacaagccacatccatggggattgttggtt
acttttattgagctgctaaagaataaagactatgacttctcgaacctatcatttaccaaa
ataactccggcggttggcaatgtgttaggtgcattaatttcccacgccaatagttctaat
acagctgtttattctgaccaggatgtttctgctaattcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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