KEGG   Pichia kudriavzevii: C5L36_0D04570
Entry
C5L36_0D04570     CDS       T06133                                 
Name
(RefSeq) uncharacterized protein
  KO
K12879  THO complex subunit 2
Organism
pkz  Pichia kudriavzevii
Pathway
pkz03013  Nucleocytoplasmic transport
pkz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pkz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    C5L36_0D04570
  09122 Translation
   03013 Nucleocytoplasmic transport
    C5L36_0D04570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pkz03019]
    C5L36_0D04570
   03041 Spliceosome [BR:pkz03041]
    C5L36_0D04570
Messenger RNA biogenesis [BR:pkz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     C5L36_0D04570
Spliceosome [BR:pkz03041]
 Complex C
  Other components
   EJC/TREX
    C5L36_0D04570
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    C5L36_0D04570
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 40385559
NCBI-ProteinID: XP_029323207
Position
4:941501..946300
AA seq 1599 aa
MSAQWSYITEELLASPLSVSTLVESLKTTPESIDDVFYELILSIAEYDRASTATYSSILA
ALFKEFPNKEEKFLVLSQAFPSTSSLNSFLKNCSIDKSLKVLHLDKNILKSEGIFPDYGR
YQYIDARTRIFSVDSYSSLHESSEGFAKYISEIISFMDKPENPSDLVDTLDQITVIYELD
ANRCTLIMLNIFANFLGDKEDVVLDICRNCSWWRTQDSNSSIQSTINSYLLNVREENILE
LRMITLLIKHEILDFKQVYNCLGPLNVKIIDSATTEANESNEMNELLDTTLEQKQKDAAV
SNVSALAMASLLPDSDDEEDNKGEKEDKVATSETLAQETILDKSKYFNKVQLLDSFIHYK
MFEYIDVVLGEFPEIPLIYDRIADRLNDLVESFITPFYFEFVDNLNLLSADVEVEVTIQI
NNLDEMFDAVIPYVNLLKYKIMRNSSLVTKLVRILKTAIFKNIEENEICFEFFRNYIFLY
LPFSHNIPLVNESFSILSCYPLETRYNLYGEYSVMVKKDPATKLNNDICEKKTKDLLKRL
SVENINTSCRSLNKLISVNPIAASNTFISHIESYSSLIELVCESSKFFNDFAWDVITYQL
LTKLYGNRSPMQPDGINYTQWFGNLTQFIGKLGSLYPESFQLSPILLSVVKSLINKNFCV
LEILQALINSMTGIKPINNLSYQQIMRLNAEKSLKQLAYFSIQDNREITRRSCSKLLRIM
IDDGVFSKIFILLSQVQFHLLNEVDNNPLKIINQRLDDVNLLLHSFITTFESNLGNKTFK
ENMTSISNLIKKYSVKPEWCFEVWRPYIAEDLRNSDNDNNVIVSELRESIKDVLPYQWEH
MNIGLYIMFWMLSLYDINYQDLSYMMEYSNLKTQITGINLKLRRRNDLPMKDVVELEEKH
RYLTRVSAYIKEDMLTHETNNSLVMKKIEKEKDQWFETADDSGIKKTMLAFMQYCLLPRL
QHSSFDAVFVSKFIFMLNSLDVQNYSLAQILENFFVKDILKDLLYTNTSLQTENLASFYQ
LVIKKLKEWWSDPEKYANEGHSFKSTQTYEEYRLLLKSWFDSLLNQVIKSLDVDDYTTRN
NTILFLKVILTQFPVIEEHADKLLDRVNQIAETDDREDIKLASRALVGLVTFNKSKLLPV
WEFYSMPSDEKEKAMKAKAEKMKAQRERDEEERKRKLEEDRKERERLMAESGKPTSKPYG
LVQLKTEKKEQRTQDVRPQRSGNNPLPENSKDRESDKTTGPTIRETSPVRDSNKEVVKSS
SGQHEDNHGPTKNQNMVEDSSKPPNTGVNMASITTLDYASIPGGPKPVSDASSAKVGPLS
LESKTAVDKTTVDKTALLPVKEQLNTTTSASGQVSTPLQQKLLVKTTKEVSDRSSSGNSN
SRTKSASMTPHSRISNTKMDASNQNESRSADKARATSNAPRERDQRNGANQRNGANQRSY
DGQMGYRNSRESRKDYSSYRDSGHPEGSNRDAYRKDGTGRNSRDDRVARDSRESQRKTPS
QKSQYRDERDDHGRGRGAWDRYDEGRSSRYYDSYDYQRDRRDSRDTRDYRTSRDARSSRA
PLPPPSAPPPPQSASTPPGGGNKRSSYDSQSGREKRRKF
NT seq 4800 nt   +upstreamnt  +downstreamnt
atgagtgcccagtggtcgtacatcactgaagagttactcgcgtcgcccttgagcgtctcg
acccttgttgaatctctgaaaacaacgccagaatcaattgatgatgtattctacgaactg
atattgagcatcgccgagtatgatcgtgcctcgacggcaacatactcttcaattctggct
gcattgttcaaagagttccctaataaagaggagaagtttcttgttctctcacaggcattc
ccgtcaacatcttcattaaattcatttttgaagaattgctcgattgacaagtctctgaaa
gtgttacaccttgataaaaatatactcaaatctgaaggaatattcccagattatggacgg
taccagtatattgatgcacgtacaaggattttttcagttgattcttattcctccctccat
gagtcaagtgaaggttttgcaaagtatatctctgagattataagcttcatggataaacct
gaaaatccttcagatttagtagacacgttggatcagattacagtgatatatgaactcgac
gcaaatagatgcacgcttataatgttaaacatctttgcaaatttcttgggtgataaagaa
gatgttgttttggatatttgtagaaactgttcttggtggagaacgcaagattcaaattct
tccatacaatccaccattaattcatacttgttgaatgttcgagaagagaatattttagag
ctaagaatgatcacgttgctcatcaaacacgaaattttggactttaagcaggtgtataac
tgtctagggcctttgaatgtgaaaattatcgattctgccactactgaagcaaacgaatca
aatgaaatgaatgaattgcttgatacgactcttgagcaaaaacaaaaagatgctgcagtt
tcgaatgtatctgcattagcgatggcttccttgttacctgattcagatgacgaggaagat
aataagggggaaaaagaggacaaggtagctacaagcgagacattggcacaggaaaccatt
cttgacaaatccaaatatttcaataaggttcaactccttgattcttttatacattacaag
atgtttgagtatattgatgtggtgctaggagaattcccagagattcctctcatttatgac
agaatagctgatcgcttgaatgatttggttgaatccttcatcacacctttttactttgag
tttgtcgacaacttaaacttactaagcgccgatgtggaggttgaagttaccatacagatc
aacaaccttgatgaaatgtttgatgcagttattccgtatgtgaacttgctaaaatataag
ataatgcggaattcctcattagtgactaagctagtacggattttgaaaactgcaatcttc
aaaaatattgaagagaatgaaatatgctttgaatttttcaggaactacatattcctttac
cttccattttcccataatattcctttagttaatgaaagcttcagtatattgtcttgctat
ccgttggaaacaaggtacaatctatacggtgagtattcggtaatggtgaaaaaggatccg
gcaactaaacttaataacgatatttgcgaaaaaaaaactaaagatttgttgaaacgttta
tcagttgagaatatcaatacttcttgccgttctttgaacaagctaatctcggttaaccca
atcgccgcatctaatacatttatctctcatattgaaagctatagttcattgatagaactt
gtctgtgaatcttccaagttttttaacgactttgcatgggatgtcattacataccaacta
cttacaaagttatatggtaaccgatccccaatgcagcctgatggtattaactacactcaa
tggtttggaaatttgacacaatttattggtaaactgggaagtttgtaccctgagtctttc
cagttatctccgattttgctatccgttgtgaagagcttgattaataaaaacttttgcgtt
ttggaaattttacaagccttgattaattccatgacaggaataaaaccgattaacaattta
tcttatcaacagatcatgagattgaatgcagagaaaagtttgaaacagttagcttatttt
tctattcaagacaatagagaaatcacgcgtaggtcgtgctccaagttgcttcgcataatg
atagacgatggagttttttcaaaaatctttatccttctctcacaagtacagtttcattta
cttaacgaagttgacaacaatcccctgaaaattattaaccaacgactagatgacgtgaac
ttgttgcttcatagtttcataacaacttttgagtccaaccttggcaacaaaacattcaaa
gagaacatgacatctatttctaatttgatcaagaaatatagcgtcaaacctgaatggtgt
tttgaggtatggagaccatacattgcggaagatttaaggaactcggataatgacaacaat
gtaattgtttcagagttgagggaaagtatcaaggatgttttaccttaccaatgggagcac
atgaacattggtttgtatattatgttttggatgttgtcgttatatgatataaattatcaa
gatttatcttatatgatggaatactcaaatctgaagacgcaaataacaggcatcaatttg
aagctcagacgtagaaatgatttacctatgaaagatgtggttgagctagaggaaaaacat
cgctatcttacgcgtgtttccgcatacattaaagaggacatgcttactcatgagactaat
aacagcttggtgatgaagaaaatcgaaaaagagaaagatcaatggtttgagaccgctgat
gatagtggtataaagaagacgatgttggcctttatgcagtactgcttactacctaggcta
cagcattcatcatttgatgcagtatttgtatctaaatttatttttatgctgaattctttg
gatgttcaaaattattctttggctcaaattcttgagaacttttttgtgaaggatatactt
aaggatttattgtacacgaatacctcgttacagactgaaaaccttgcttcattttatcag
ttggttatcaagaaattgaaagaatggtggtcagatcctgaaaaatatgcaaatgagggt
cacagcttcaaatcaacacaaacttatgaggagtatcgtttgttattgaagtcttggttt
gatagcttattaaatcaggtgatcaaatccttggatgttgatgattacaccactcgaaat
aataccatcttattcttaaaggtaatccttacccagttccctgtaattgaggaacacgca
gacaagttacttgatagggtgaaccaaattgccgaaaccgatgacagagaggacataaag
cttgcctcgcgtgcgcttgttgggctagtcacattcaacaaatccaaattgcttccagtc
tgggagttctatagtatgccatcggacgagaaggaaaaggccatgaaggccaaggcagaa
aagatgaaagcacagcgagaaagagatgaggaggaaaggaaaagaaagttggaagaggat
cggaaggaaagggaacggttgatggcagaatcaggcaagcctacatccaaaccgtatgga
ttggtccaattgaaaactgagaagaaggaacaaagaactcaggatgtgcgtccacaaaga
tccgggaataatccattaccggaaaacagcaaagacagggaaagcgataaaacgacagga
ccaaccatcagagaaactagtccagtgagagacagtaacaaagaagttgtaaagagttct
tctggtcaacatgaagacaatcatggtccaaccaaaaatcaaaatatggtggaagattct
agtaagcctcctaacactggtgtgaatatggcaagtatcacaactctggattatgcttcg
attccgggaggccctaagcctgtgagtgatgcatcatcagcaaaggttggtccgttatct
ttggaatcaaagaccgctgtcgacaaaaccactgtcgacaaaactgctttgcttcctgta
aaagagcaattgaatactaccacatcagcttcggggcaagtttccactcctctgcagcag
aaactgttggtaaaaaccacaaaggaagtatctgacaggtcatccagcgggaactcaaat
tcaagaacaaagtctgcatctatgaccccccattcacgaatttccaatacaaaaatggac
gcaagtaaccagaacgagtccagatctgcagacaaggcaagagcaacttctaatgcacca
cgcgagagagaccaaaggaacggtgccaaccaaagaaacggtgccaaccaaagaagctac
gatggacaaatggggtacagaaattcaagagagtctcgaaaagactacagtagctaccgt
gatagcggtcatcccgaaggtagtaatcgagatgcgtataggaaggacggaactggacga
aacagcagagacgacagagttgctagagacagcagagaatctcaacgaaagacgcctagt
cagaaatcccagtaccgagacgagagagatgatcatggcagaggtagaggtgcctgggat
aggtatgatgaggggcgcagtagccggtattacgactcatatgactaccagagagaccgt
agagactcaagggatacacgggactatcgaacttcacgagacgcacgttcctctcgtgcc
ccactgccgccaccgtcagcaccacctcccccacagtccgcctctactcccccaggagga
ggtaacaagcgttccagttatgacagccaaagtggtagagagaaacgtcggaaattttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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