KEGG   Parvibaculum lavamentivorans: Plav_3030
Entry
Plav_3030         CDS       T00580                                 
Name
(GenBank) seryl-tRNA synthetase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
pla  Parvibaculum lavamentivorans
Pathway
pla00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:pla00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Plav_3030
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pla01007]
    Plav_3030
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pla03016]
    Plav_3030
Enzymes [BR:pla01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     Plav_3030
Amino acid related enzymes [BR:pla01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   Plav_3030
Transfer RNA biogenesis [BR:pla03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Plav_3030
 Prokaryotic type
    Plav_3030
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N YfeC-like DUF6823
Other DBs
NCBI-ProteinID: ABS64637
UniProt: A7HXK4
Position
3230885..3232192
AA seq 435 aa
MFDIKAIRDDAGAFDAGLAKRGLAPQAARLIEIDERRRAIITSLQELQQRRNDASKQIGQ
AKAKKDDALAQSLMEEVASIKSAIQEGEEKERAANAEIEAALASIPNIPFDDVPVGPDES
ANVIRHSHGKAREMNFAPKEHFDLGEALGLMDFEAAAKMSGARFTVLKGQLARLERAIGN
FMVDLHTTEFGYEEVAPPLMVRDDAMFGTAQLPKFEDDQFATFKGLARDDQEKYWLIPTA
EVPLTNLVRESILSEEELPKRFTAYTACFRAEAGSAGRDTRGMIRQHQFSKVELVSITTP
EKSREEHERMLSCAEEVLKRLDLHYRVMTLSTGDMGFASRKTYDIEVWLPGQNAFREISS
CSVCGDFQARRMNARYRPKGEKNTRFVHTLNGSGLAVGRALVAVMENYQQADGSITVPTA
LQPYMGGQEVIAVHG
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgttcgacatcaaggccattcgcgacgacgctggggcattcgatgccgggcttgcgaaa
cgcgggctcgcgccgcaggccgcgcgccttatcgagatcgacgagcgccgccgcgccatc
ataacttcccttcaggaattgcagcagcgccgcaacgatgcctccaagcaaatcggccag
gcgaaggcgaagaaagacgacgcgctggctcaaagcctgatggaagaggtggcgagcatc
aaaagcgccattcaggagggcgaggagaaggaacgcgccgccaatgccgagattgaagcg
gcgctggcctccattcccaatattcccttcgacgatgttcctgtcggtcccgatgagagc
gccaatgtcatccgccacagccatggcaaggcgcgtgagatgaacttcgcgccgaaagag
catttcgatctcggcgaggccctgggcctgatggatttcgaggcggctgcgaagatgtcc
ggcgcgcggttcacagtgctcaagggccagctcgcgcggctcgaacgcgccatcggcaat
ttcatggtggatctccacacgaccgagttcggctatgaggaagtcgcgccgcccctgatg
gtgcgcgacgacgccatgttcggcaccgcacagcttccgaagttcgaggacgaccagttc
gcgacattcaaaggtctggcgcgtgacgatcaggaaaaatactggctgatcccgacagcc
gaagtgccgctgaccaatctcgtgcgcgagagcatcctctccgaagaggagctgccgaaa
cggtttaccgcttacacagcctgtttccgcgccgaggctggatccgccgggcgcgatacg
cgcggcatgatccgccagcatcagttttccaaggttgaactcgtctcgatcacgacgccg
gagaagtcacgcgaggaacacgagcggatgctctcctgcgccgaagaggtgctgaagcgg
ctcgatctgcattatcgcgtcatgacgctgtccaccggcgacatggggtttgcctcgcgc
aagacctatgacatcgaggtctggctgccggggcagaacgccttccgggaaatttcgtcc
tgttccgtctgcggcgacttccaggcgcggcggatgaatgcgcgctaccggcccaagggc
gagaagaacacgcgcttcgtgcatacgttgaacggatccggccttgccgtcgggcgcgcg
cttgtggcggtgatggagaattaccagcaggccgatggctccatcactgttcccacggcg
ctccaaccctatatgggcgggcaggaggttatcgccgttcatggctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (73)   

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