KEGG   Parvibaculum lavamentivorans: Plav_3124
Entry
Plav_3124         CDS       T00580                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pla  Parvibaculum lavamentivorans
Pathway
pla02024  Quorum sensing
pla03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Plav_3124
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Plav_3124
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pla03019]
    Plav_3124
   03036 Chromosome and associated proteins [BR:pla03036]
    Plav_3124
Messenger RNA biogenesis [BR:pla03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Plav_3124
Chromosome and associated proteins [BR:pla03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Plav_3124
SSDB
Motif
Pfam: Hfq
Other DBs
NCBI-ProteinID: ABS64731
UniProt: A7HXU8
Position
complement(3335130..3335378)
AA seq 82 aa
MNEKTHNLQDTFLNHVRKNKTTLTIFLVNGVKLQGVVTWFDNFCVLLRRDGHSQLVYKHA
ISTIMPAQPVQLFEPEANGEEG
NT seq 249 nt   +upstreamnt  +downstreamnt
atgaatgagaagacccataacctgcaggatacgttcctgaaccacgttcgcaagaacaag
acgaccctcaccatctttctggtaaatggcgtcaagcttcagggcgtggtcacctggttc
gacaacttttgtgtgttgctgcgccgggacggccattcgcagctcgtgtataagcacgcg
atatcgaccattatgccggcccagcccgttcagcttttcgagcctgaagccaacggggag
gagggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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