KEGG   Plantactinospora sp. BC1: C6361_11065
Entry
C6361_11065       CDS       T05377                                 
Symbol
groL
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
plab  Plantactinospora sp. BC1
Pathway
plab03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:plab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C6361_11065 (groL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plab03019]
    C6361_11065 (groL)
   03110 Chaperones and folding catalysts [BR:plab03110]
    C6361_11065 (groL)
   03029 Mitochondrial biogenesis [BR:plab03029]
    C6361_11065 (groL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:plab04147]
    C6361_11065 (groL)
Enzymes [BR:plab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     C6361_11065 (groL)
Messenger RNA biogenesis [BR:plab03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     C6361_11065 (groL)
Chaperones and folding catalysts [BR:plab03110]
 Heat shock proteins
  HSP60 / Chaperonin
   C6361_11065 (groL)
Mitochondrial biogenesis [BR:plab03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    C6361_11065 (groL)
Exosome [BR:plab04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   C6361_11065 (groL)
  Exosomal proteins of other body fluids (saliva and urine)
   C6361_11065 (groL)
  Exosomal proteins of breast cancer cells
   C6361_11065 (groL)
  Exosomal proteins of colorectal cancer cells
   C6361_11065 (groL)
  Exosomal proteins of bladder cancer cells
   C6361_11065 (groL)
SSDB
Motif
Pfam: Cpn60_TCP1 CbiA DUF5021
Other DBs
NCBI-ProteinID: AVT29944
Position
2616375..2617997
AA seq 540 aa
MAKMIAFDEEARRGLERGMNTLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMALKRGIE
AAVANVSEELSKLAKDVETKEQIASTASISAGDTSVGEIIAEAMDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISGYFMTDPDRMEAVLDDPYILIVNSKISTVKDLLPILEKVMQ
SGKPLAIIAEDVEGEALATLVVNKVRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGQPIS
EEVGLKLDAVGLDMLGRARKVVVTKDETTIVDGAGDADQINGRVNQIRAEIEKSDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVELKERKHRIEDAVRNAKAAVEEGIVPGGGVALVQA
GKTAFDKLDLAGDEATGAQIVKIALDAPLRQIAVNAGLEGGVVVEKVRNLDAGHGLNAAN
GEYVDLLQAGIIDPAKVTRSALQNASSIAALFLTTEAVVADKPEKTPAAPAAPGGGDMDF
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggccaagatgatcgcgttcgacgaggaggcgcgccgcggccttgagcggggcatgaac
accctcgccgacgccgtaaaggtgacgctgggcccgaagggccgcaacgtcgtgctcgag
aagaagtggggcgcccccaccatcaccaacgatggtgtgagcatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggtgcggagctggtcaaggaggtcgccaagaagacc
gacgacgtcgccggtgacggcacgacgacggcgaccgtcctcgcccaggcgctggtccgt
gagggcctgcgcaacgtcgcggccggtgccaacccgatggccctgaagcggggcatcgag
gccgccgtcgcgaacgtctcggaggagctgagcaagctcgccaaggacgtcgagaccaag
gagcagatcgcctccaccgcctccatctccgccggtgacaccagcgtcggcgagatcatc
gccgaggcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagagcaacacc
ttcgggctcgagcttgagctgaccgagggcatgcgcttcgacaagggctacatctcgggg
tacttcatgaccgaccccgaccggatggaggccgtgctcgacgacccgtacatcctgatc
gtcaacagcaagatctcgacggtcaaggacctgctgccgatcctcgagaaggtcatgcag
tcgggtaagccgctggccatcatcgccgaggacgtcgagggcgaggccctggcgaccctg
gtggtcaacaaggtccggggcaccttcaagtccgtcgccgtcaaggcgccgggcttcggt
gaccgccgcaaggccatgctgggcgacatcgccatcctgaccggcgggcagccgatcagc
gaggaggtcggcctcaagctggacgccgtcggcctcgacatgctgggccgggcccgcaag
gtcgtggtgaccaaggacgagaccaccatcgtcgacggtgccggcgacgccgaccagatc
aacggtcgggtcaaccagatccgcgccgagatcgagaagagcgactccgactacgaccgc
gagaagctgcaggagcgcctggccaagctggccggcggtgttgcggtgatcaaggtcggc
gcggccaccgaggtcgagctgaaggagcgcaagcaccgcatcgaggacgcggtgcgcaac
gcgaaggccgccgtcgaggagggcatcgtccccggtggtggtgtcgcgctggtccaggcc
ggcaagaccgccttcgacaagctggacctggccggcgacgaggcgaccggcgcgcagatc
gtcaagatcgcgctggacgccccgctgcggcagatcgccgtcaacgccggcctcgagggc
ggcgtcgtggtcgagaaggtccgcaacctggacgccgggcacggcctcaacgcggccaac
ggtgagtacgtcgacctgctccaggccggcatcatcgacccggccaaggtgacccgttcg
gcgctgcagaacgcgtcgtcgatcgcggccctgttcctgaccaccgaggctgtggtggcg
gacaagccggagaagaccccggctgccccggccgcgccgggcggcggggacatggacttc
tga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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