KEGG T05377: C6361

Plantactinospora sp. BC1: C6361_15850

Entry

C6361_15850       CDS       T05377

Name

(GenBank) polyribonucleotide nucleotidyltransferase

K00962

polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]

Organism

plab Plantactinospora sp. BC1

Pathway

plab03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:plab00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C6361_15850
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plab03019]
    C6361_15850
   03016 Transfer RNA biogenesis [BR:plab03016]
    C6361_15850
Enzymes [BR:plab01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     C6361_15850
Messenger RNA biogenesis [BR:plab03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     C6361_15850
Transfer RNA biogenesis [BR:plab03016]
Prokaryotic type
  tRNA degradation factors
   C6361_15850

SSDB

Motif

Pfam:

RNase_PH PNPase KH_1 RNase_PH_C S1 KhpA-B_KH KH_2

Other DBs

NCBI-ProteinID:

AVT30703

Position

complement(3674156..3676546)

AA seq 796 aa
MTETSNPTNSTLGTQHRTAVIDNGSFGTREITFSTGRLARQAAGSVLAQLGETVVLSATT
ASRQPKEQFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPSFVK
GLRNEVQVVETVLALDPQHPYDVVAINAASLSTKLSGLPFSGPIGATRMAHVDGQWVAFP
TIEELGRATFDMVVAGRTLPDGDVAIMMVEAEATEHTVALVAGGAPAPTEEVVASGLEAA
KPAIRELCRAQSELAEVSAKPVADFPVFLDYSDDVYEAVAGAARGEVAEALKIAGKADRE
EALDRIKERVVEQLAGSFEGREKELGAAFRSLNKSEVRARVLREQVRMDGRGPRDIRPLS
AEIAVLPRVHGSALFERGETQILGVTTLNMLRMEQALDTLSPEKSKRYMHNYNFPPYSTG
ETGRVGAPKRREIGHGALAERALIPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTL
ALLSAGVPLKAPVAGIAMGLISDEVDGKTQYVTLTDILGAEDAFGDMDFKVAGTREFVTA
LQLDTKLDGIPSDVLAAALAQAYEARQVILGVMQEAIEGPATMSDYAPRVTTVKIPVDKI
GMVIGPKGQTINAIQDETGAEISIEDDGTIYVGATNGPSAEAAVERINAIANPTLPKVGD
KFLGTVVKTAAFGAFISLLPGRDGLLHISKVGDGKRVERVEDFLNVGDKVEVSIADIDAR
GKIYLDKVRPEGEEAPAQPAGGERPAGRDRGDRGPRDRSDRDRGDRGPSRGDREGGEGGG
GEGGGGEPRRRRNRHS

NT seq 2391 nt +upstreamnt +downstreamnt
atgaccgaaacgtccaaccccaccaacagcacgctgggcacccagcaccgcaccgccgtg
atcgacaacgggtccttcggcacccgtgagatcaccttctccaccgggcggctcgcccgg
caggccgccggctccgtcctcgcccagctcggcgagaccgtggtcctctccgcgaccacc
gcgagcaggcagccgaaggagcagttcgacttcttcccgctcaccgtcgacgtcgaggag
cggatgtacgcggcgggtcggatccccggctcgttcttccggcgtgagggtcggcccagc
gaggacgcgatcctcacctgccggctgatcgaccggccgctgcgcccctccttcgtcaag
gggctgcgcaacgaggtacaggtcgtcgagaccgtgctggcgctcgacccgcaacacccg
tacgacgtcgtggcgatcaacgccgcctcgctctccaccaagctctccggcctgccgttc
tccggcccgatcggggccacccggatggcgcacgtggacggccagtgggtcgccttcccg
accatcgaggagctgggccgggccaccttcgacatggtggtcgccggccgtaccctgccg
gacggcgacgtcgcgatcatgatggtcgaggccgaggcgaccgagcacaccgtggcgctg
gtcgccggtggcgccccggcgccgaccgaggaggtcgtggcgagcggcctggaggccgcc
aagccggccatccgggagctgtgccgggcgcagagcgagctggccgaggtctccgccaag
ccggtcgccgacttcccggtcttcctcgactactccgacgacgtctacgaggcggtcgcc
ggtgcggcgcgcggcgaggtcgccgaggcgctgaagatcgccggcaaggcggaccgcgaa
gaggccctggaccggatcaaggagcgggtcgtcgagcagctcgccggcagcttcgagggc
cgggagaaggagctcggcgcggctttccgctcgctgaacaagtccgaggtacgcgccagg
gtgctccgcgagcaggtccggatggacggccgcgggccgcgcgacatccggccgctgagc
gccgagatcgcggtgctgccccgggtgcacggctcggcgctcttcgagcgcggcgagacg
cagatcctcggcgtcaccacgctgaacatgctccggatggagcaggcgctggacaccctc
tccccggagaagtccaagcgctacatgcacaactacaacttcccgccgtactcgaccggt
gagaccggccgggtcggtgcgccgaagcggcgcgagatcgggcacggcgcgctggccgag
cgggcactgatcccggtgctgcccagccgcgaggagttcccgtacgcgatccgccaggtc
tccgaggcgctcggctcgaacggctccacctcgatgggttcggtctgcgcctccacgctg
gccctgctcagcgccggtgtgccgctgaaggccccggtcgccggcatcgcgatgggcctg
atctccgacgaggtcgacggcaagacgcagtacgtgacgctgaccgacatcctcggtgcc
gaggacgccttcggcgacatggacttcaaggtcgccggcaccagggagttcgtcaccgcg
ctccagctcgacaccaagctcgacggcatcccgtccgacgtgctcgcggcggcgctcgcg
caggcgtacgaggcgcggcaggtcatcctcggcgtgatgcaggaggcgatcgagggtccg
gccacgatgtcggactacgcgccccgggtgaccacggtgaagatcccggtcgacaagatc
ggcatggtgatcgggccgaagggccagaccatcaacgccatccaggacgagaccggcgcc
gagatctcgatcgaggacgacggcaccatctacgtcggcgcgaccaacggcccgtcggcc
gaggccgcggtcgagcggatcaacgcgatcgcgaacccgacgctgccgaaggtcggcgac
aagttcctcggcacggtggtcaagaccgccgcgttcggggcgttcatctcgctgctgccg
ggccgggacggcctgctgcacatctccaaggtgggcgacggcaagcgggtcgagcgggtg
gaggacttcctcaacgtcggcgacaaggtcgaggtgtcgatcgccgacatcgacgcccgg
ggcaagatctacctggacaaggtgcggcccgagggcgaggaggcgccggcccagccggcc
ggcggcgagcgtccggccggtcgggaccggggcgaccgtggcccgcgcgaccgcagcgac
cgggaccgcggcgaccgtggcccgagccggggcgaccgcgagggtggcgaaggtggcggc
ggcgagggcggtggcggcgagccgcgccgccgacgcaaccggcacagctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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