KEGG   Candidatus Planktophila dulcis: A1s21155_00705
Entry
A1s21155_00705    CDS       T05051                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
plak  Candidatus Planktophila dulcis
Pathway
plak03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:plak00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    A1s21155_00705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plak03400]
    A1s21155_00705
Enzymes [BR:plak01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     A1s21155_00705
DNA repair and recombination proteins [BR:plak03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     A1s21155_00705
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ASY11536
Position
143464..144177
AA seq 237 aa
MEWLGRLYKSIELLDKAIVKCHKCPRLVQWREEVAVVKRKAYENEKYWGKPVPGFGSSKP
KMLIVGLAPGAHGANRTGRIFTGDSSGDWLYGSLHRIGIAKIATSTSRDDGQELCDTRIS
MAVRCAPPENKPTTEERDACAPFFENELELIAPTVRSFVALGSFGWQVLIKSLKAQGHKV
PAGKFGHGSTIKYSHDGINYLIVGSYHPSQQNTFTGKLTKPMLDSVLKKAAKFAGVL
NT seq 714 nt   +upstreamnt  +downstreamnt
atggaatggcttggtcgcttgtataagtcgatcgaacttctcgataaggcgattgttaaa
tgccataagtgcccgcggttagtccagtggcgagaagaagtagctgttgttaaacgtaag
gcatatgagaacgagaagtactggggtaagcctgttccaggattcggctctagcaaacca
aagatgctcattgttggattagcacctggtgcacatggtgcaaatagaaccggccgtatc
ttcactggtgattcatctggcgattggctctacggttcattgcaccgcatcggtattgca
aagatagcaacatcaacatctcgcgatgatggacaagagctgtgcgatacacgcatctca
atggcggtgcgttgtgctccgcctgagaacaaaccaactaccgaagagcgcgatgcatgt
gcaccattttttgaaaatgagctagaactgatcgcaccgactgttcgttcatttgtagca
ctcggtagctttggttggcaggtattaatcaaatcgcttaaagctcaaggtcataaagtt
cccgctggaaaattcgggcatgggtcaacaattaagtattcgcatgacggcattaactat
ctaatagtcggtagttatcacccaagccagcagaacacatttacaggcaaactcaccaaa
ccaatgttggattcagtactcaaaaaggcagcaaagttcgcgggagttctctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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