KEGG T06390: DNR44

Planomicrobium sp. Y50: DNR44_010340

Entry

DNR44_010340      CDS       T06390

Symbol

rsmB

Name

(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

play Planomicrobium sp. Y50

Brite

KEGG Orthology (KO) [BR:play00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:play03009]
    DNR44_010340 (rsmB)
Enzymes [BR:play01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     DNR44_010340 (rsmB)
Ribosome biogenesis [BR:play03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    DNR44_010340 (rsmB)

SSDB

Motif

Pfam:

Methyltr_RsmB-F NusB Methyltransf_31 FtsJ Methyltransf_25 Methyltr_RsmF_N Met_10 Methyltransf_23 PCMT NSUN5_fdxn-like Ubie_methyltran Fibrillarin GCD14 Methyltransf_24 BMT5-like

Other DBs

NCBI-ProteinID:

QHJ70982

Position

2072271..2073617

AA seq 448 aa
MKNKKLHGNVRDAAFSILWAVENKQAYSNLLLHQTIESYGISAKNRGLLTEITYGTLQHQ
MTLDYYLEPYLKGKVEPWVKTLLRMSLYQIVYLDRIPSHAVVHEAVEIAKRRGHGGVASL
VNGVLRSVQRSGVRSFNAIADPIEKISIETSHPAWMIKRWSEQFGLEKTREMALENNKIP
SQTVRVNTVRATVEEAIEMLESEGLEAVPSKIIPECLVITGGQPARTATFEKGFITIQDE
SSMLPSYALQLEPGMKVLDMCAAPGGKSTHIAEKLNNKGSLYSMDLHPHKVKLIKESADR
LGHTVIETEVGDGKKSVERFGKEQFDRVLVDAPCSGLGVIKRKPDIKYTKKEEDFSRLQE
IQIELLDQAAQLLKPDGILVYSTCTVDNMENRGTAERFLKEHPDMEKIQVSLPEALGIKH
SGFVQVFPQDFGSDGFFIAAFRKTAAVE

NT seq 1347 nt +upstreamnt +downstreamnt
atgaaaaataaaaaattgcacggcaatgtccgcgacgctgcattttcgattctttgggca
gttgaaaacaagcaagcctacagcaaccttcttttgcatcaaacaattgaaagttacggg
atttcagcaaaaaaccgcggcttgctgacagaaatcacttatggcacattgcagcatcag
atgacgttggattattatctggaaccttatttaaaaggcaaagtcgagccctgggtcaaa
accttattgcggatgtcgctgtatcagatcgtttacctggaccgcatcccttcgcatgct
gtcgtccatgaagcggtggaaatcgccaaacggcggggacacggaggagtcgcttcttta
gtgaacggagttctgcggtccgtacagcgttcaggtgtccggtcatttaatgcgattgcc
gatccgatcgagaaaatttctatagaaacgagccatccggcgtggatgatcaagcgctgg
tccgaacaattcgggttggaaaagacgcgtgaaatggctttggaaaacaataaaatccca
tcacagacagttcgggtgaataccgtccgcgcaacagtggaggaagcaattgaaatgctt
gaatccgaagggctcgaagcggttccaagcaaaattattcctgaatgcctcgtgataaca
ggcggccagcccgccagaacagcgacttttgaaaaaggcttcatcacgattcaggatgaa
agttcaatgctgccttcttatgcattgcagcttgaaccgggtatgaaagtcttggatatg
tgtgctgcaccgggggggaaatcaactcatatcgctgaaaagctgaacaataaaggcagc
ctttactcgatggacctccatccgcataaagtgaaattgatcaaggaatccgccgaccgt
ctgggccataccgttatagaaacggaagtgggagatggcaaaaagagtgttgagcgtttt
ggcaaagagcaattcgaccgtgtcctagtggatgcaccttgcagcggactcggcgtcatc
aaacggaaacccgatattaaatatacaaaaaaagaagaggatttcagcaggttgcaggaa
atccagattgaattgctggatcaggctgcgcaattgctgaagccggacggcatattggtt
tacagtacatgcacagttgataatatggaaaaccgcggcactgccgaaagatttctgaag
gagcatccggatatggaaaaaatccaggtttcattgcctgaagctcttggcattaaacat
agtggctttgtgcaggtatttcctcaggatttcggaagcgatggatttttcatcgccgct
ttccggaaaactgctgcagttgaatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (15)   
   Pfam (15)   
All databases (22)   

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