KEGG T06390: DNR44

Planomicrobium sp. Y50: DNR44_015540

Entry

DNR44_015540      CDS       T06390

Name

(GenBank) RluA family pseudouridine synthase

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

play Planomicrobium sp. Y50

Brite

KEGG Orthology (KO) [BR:play00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:play03009]
    DNR44_015540
Enzymes [BR:play01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     DNR44_015540
Ribosome biogenesis [BR:play03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    DNR44_015540

SSDB

Motif

Pfam:

PseudoU_synth_2 bDLD2

Other DBs

NCBI-ProteinID:

QHJ71941

Position

3110371..3111216

AA seq 281 aa
MSWNYEIKDDGMTVEELLRTEWGLGKKVVHELRMAKSVKNDKFQEVVWKEPLSKGTVLQF
DLPKADSPYEPNHEIELPVLFEDEHFLIARKPKGMNTHPNEIGQNDTFINSVIGHIIRGG
GSYGEHVHRLDQGTSGLLMVAKHPVAKNILDRMLEQKQLVRDYEAVVKGKVHNKSGTIDF
AIGRDRHHPTRRMVSPTGQSAVTHYKLLRHMEGKSLLQLSLETGRTHQIRTHLSHIGHPI
IGDELYDGPSTQDGAYHLHAFRMSFIHPFTNEKIVVEDKAR

NT seq 846 nt +upstreamnt +downstreamnt
atgagctggaattatgaaatcaaagatgacggcatgaccgtcgaagaattgctgcgcacc
gaatggggccttggcaagaaagttgtccatgaacttcgcatggccaaatctgtgaaaaat
gataagtttcaggaagttgtctggaaagaacccctttcaaaaggaacggttctgcaattc
gatttgccgaaagcggattcgccttatgaacctaaccacgaaatcgaattgccagtgctg
ttcgaagatgaacattttctgattgcccggaaacctaaagggatgaatacccatcccaac
gaaatcggtcaaaacgacaccttcattaattcagtcatcggccatatcatccgcggcggc
ggatcatatggtgaacacgtccacaggctcgatcaggggacttccgggttactgatggta
gcgaagcacccggttgcgaaaaacatcctggaccgcatgctggaacagaaacaattggtc
cgtgattacgaagccgtcgtcaaaggcaaggtgcacaataaatccggcaccatcgacttc
gccatcggccgggaccgtcatcatccgacccgacgcatggtatcacctaccggccaaagt
gctgtaacgcattataaattattacgccatatggaaggcaaatcgctcctgcagctgtca
cttgaaaccggccggacgcatcagatccgaacccacctttcccatatcggacatccgatc
atcggcgatgaattatacgacggaccatcgactcaggacggcgcctatcacctgcatgcg
ttccggatgtcattcatccatccgtttacaaatgagaagatcgtcgtggaagataaagcg
agataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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