KEGG   Candidatus Portiera aleyrodidarum AD-CAI: PAD_026
Entry
PAD_026           CDS       T03737                                 
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
plc  Candidatus Portiera aleyrodidarum AD-CAI
Pathway
plc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:plc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PAD_026 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:plc03021]
    PAD_026 (rho)
   03019 Messenger RNA biogenesis [BR:plc03019]
    PAD_026 (rho)
Transcription machinery [BR:plc03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     PAD_026 (rho)
Messenger RNA biogenesis [BR:plc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     PAD_026 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 NACHT AAA_25
Other DBs
NCBI-ProteinID: CEI58574
UniProt: A0A8D9NC74
Position
I:28367..29623
AA seq 418 aa
MNLTELKKKNVHELLELAISMNIENLIRYRKQDIIFAILKKHAEGGEDIYGEGVLEILQE
GFGFLRSSDSSYQSGPDDIYVSPSQIRRFNLRKGDSISGKIRPPKDGERYFALLKVNKIN
FDRIETVKKKILFENLTPLFPNYRLLMEIGNGSTEDLTSRILDLVAPIGKGQRGLIVSPP
KAGKTMMMQNIANAIVRNSPECYLIVLLIDERPEEVTEMSRTVRGEVIASTFDEPPTRHV
QLAEMVIEKAKRLVEHKKDVVIMLDSLTRLARAYNTVVPSSGKVLTGGVDSNALEKPKRF
FGVARNIEEGGSLTILASALIDTGSKMDDIIFEEFKGTGNMEAHLDRKLAEKRVFPAINI
RRSGTRREDLLCSEEEIQRMWILRKLLHTMEDVAATELLIDRLKNTKNNIEFFESMKR
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgaatttaactgaacttaaaaaaaaaaatgtacatgaattattagaattagctatatct
atgaatatagaaaatctaatacgttatagaaaacaagatattatatttgctattcttaaa
aaacatgcagaaggaggagaagatatttatggagaaggagttttagaaatattacaagaa
ggttttggttttttaagaagttctgatagttcttatcaatcaggtccagacgatatatat
gtttctccttcacaaattagacggtttaatctacgtaaaggtgatagtatatctgggaaa
atacgtcctcccaaagatggtgaaagatattttgctttattaaaagtaaataaaattaat
tttgatagaatagaaacagttaaaaaaaaaattttatttgaaaatttaactccattattt
ccaaattatagattacttatggaaattggtaatggttctactgaagatttaacttctaga
atcttagatttagttgctccaatcggcaaaggtcaacggggcttaattgtttctcctcca
aaagctgggaagaccatgatgatgcaaaatatagctaatgcaatagtaagaaatagccct
gaatgctatttaattgttttactaattgatgaacgtcctgaagaagtaacagaaatgtct
agaactgtaagaggagaagttatagcatctacttttgatgagccacctactagacatgtt
cagttagctgaaatggttatagaaaaagctaaaagattagttgaacataaaaaagatgta
gttattatgttagattctcttacacgtttagcaagagcttataatacagtagtgccatct
tctggtaaagtcttaactggtggagtagattcaaatgctcttgaaaaacctaaacgattt
tttggtgttgcacgtaatatagaagaaggtggtagtttaactattttagcatctgcttta
atagatactgggtcaaaaatggatgatataatttttgaagaatttaaaggtacaggtaat
atggaagcacatttagatcggaaattagcagaaaaaagagtttttcctgcaataaatatt
agaaggtctggaacgcgtagagaagatttattatgtagtgaagaagaaatacaaagaatg
tggattttacggaaattattgcatacaatggaagatgtagcagcaactgaattattaata
gatagattaaaaaatactaaaaataatatagaattttttgaatcaatgaaacgttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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