KEGG   Candidatus Portiera aleyrodidarum AD-CAI: PAD_040
Entry
PAD_040           CDS       T03737                                 
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
plc  Candidatus Portiera aleyrodidarum AD-CAI
Pathway
plc03030  DNA replication
plc03430  Mismatch repair
plc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:plc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PAD_040 (holB)
   03430 Mismatch repair
    PAD_040 (holB)
   03440 Homologous recombination
    PAD_040 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:plc03032]
    PAD_040 (holB)
   03400 DNA repair and recombination proteins [BR:plc03400]
    PAD_040 (holB)
Enzymes [BR:plc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PAD_040 (holB)
DNA replication proteins [BR:plc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PAD_040 (holB)
DNA repair and recombination proteins [BR:plc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PAD_040 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNApol3-delta_C
Other DBs
NCBI-ProteinID: CEI58591
UniProt: A0A8D9NB11
Position
I:41979..42977
AA seq 332 aa
MNKKNIFLPLPWHKNKLKKILFLIKKKISPHALLLLGQKGIGKNKFAKILISIIVCSNFN
NKYKISNSSCGNCNKCLMWINGYHPNVRKYTIKINIDSIRILNKFIEKTSQYDSYRIIFI
KNANYMTIEAANALLKNLEEPGERILFILTSNFLLLPTIKSRCCKIFFKPIYKKKFLVWI
ASHIYYSAESNIFLNLTCNNPLLATNINYILKLRQIINIIFFNLINGSEPLNEIKKINIK
YINLIFDFGIIFIEDIIRLLSGIKNIKNYDNISLYIILIKKNILLNNWFKLLNITYKKRK
IFINNKNINKKLLLETWFIKITNFLFNKVYKE
NT seq 999 nt   +upstreamnt  +downstreamnt
atgaataaaaaaaatatatttttacctttaccttggcataaaaataaattaaaaaaaatt
ttatttttaataaaaaaaaaaattagtccacatgctttattattattagggcaaaaaggt
attggaaaaaataagtttgctaaaatattaatatcaattatagtgtgttctaattttaat
aataaatataaaataagtaattctagttgtggaaattgtaataaatgcttaatgtggatt
aatggatatcatcctaatgttagaaaatatacaattaaaataaatattgattcaataaga
attcttaataaatttattgaaaaaacatcgcaatatgatagttatcgtattatttttatt
aaaaatgcaaattatatgacaattgaagcagctaatgcgttattaaaaaatcttgaagaa
ccaggggaacgtattttatttatattaacttctaattttttattattacctactattaaa
agtagatgttgtaaaattttttttaaacctatatataaaaaaaaatttttagtttggata
gcttcacatatatattattcagcagaatcaaatatatttttaaatttaacatgtaataat
cctttattagctactaatataaattatattttaaaattaagacaaataataaatattatt
ttttttaatttaattaatggttcagaacctcttaatgaaataaaaaaaataaatataaaa
tatattaatttaatttttgattttggtataatttttattgaagatataatcaggttatta
tctggtattaagaatataaaaaattatgataatatatcattatatataatattaataaaa
aaaaatatattattaaataattggtttaagttattaaatataacttataaaaaacggaaa
atatttattaacaataaaaatattaataagaaattattattagaaacatggtttattaaa
ataactaattttttatttaataaagtttataaggaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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