KEGG   Pleomorphomonas sp. SM30: OHA_1_00935
Entry
OHA_1_00935       CDS       T05766                                 
Name
(GenBank) uracil DNA glycosylase superfamily protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
pleo  Pleomorphomonas sp. SM30
Pathway
pleo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pleo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    OHA_1_00935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pleo03400]
    OHA_1_00935
Enzymes [BR:pleo01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     OHA_1_00935
DNA repair and recombination proteins [BR:pleo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     OHA_1_00935
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: BBE71362
Position
1:1024489..1025406
AA seq 305 aa
MMLAPSPTDGGSDALLALLEWYAGAGVDAVLDDAPIDRFAASAAEQAQRRPRPATPPAQR
AERALPGSAGAPASARQAPPQPSAAPAPTALSSSDAVMAARTAAASAGTLEALRDLLAGF
DGCNLKLTAKNLVFGDGSPSARLMFVGEAPGRDEDLEGRPFVGRSGQLLDRMLRAIGLDR
GRDVYIANTIYWRPPGNREPSDVEVAICRPFILRQIELVDPDVLVLLGGQAAKTLLGGDA
AKSGIRKLRGRWMGFDTGRRTVPALPTYHPAYLLRSPIEKRLAWRDMLSVRARLAGGDGA
AEPER
NT seq 918 nt   +upstreamnt  +downstreamnt
atgatgctcgccccctccccgaccgacggcggatccgacgccctgctggcgctgctcgag
tggtacgccggcgccggcgtcgacgccgtgctcgacgacgcgccgatcgaccgcttcgcc
gcctcggcggccgagcaggcccagcgccgcccgcgcccggcgacgccgcccgcgcagcgg
gccgagcgcgccctccccggctcggccggcgcgcccgcctctgcccggcaggcgccgccg
cagccctccgccgcgccggcgccgaccgcgctgtcctcctccgacgcggtgatggccgcg
cgcacggccgcggcctccgccggcacgctcgaggcgctgcgcgacctcctcgccggcttc
gacggctgcaatctcaagctcacggccaagaacctcgtgttcggcgacggttcgccgtcg
gcccggctgatgttcgtcggcgaagcgcccggccgcgacgaggacctcgagggtcggccc
ttcgtcggccgctccggccagttgctcgaccgcatgctccgggcgatcgggctcgaccgc
ggccgcgacgtctacatcgccaacaccatctactggcgcccgcccggcaaccgcgagccg
agcgacgtcgaggtcgcgatctgccggccgttcatcctgcgccagatcgagctggtcgac
cccgacgtgctggtgctgctcggtgggcaggccgccaagacgctgctcggcggcgacgcc
gcgaagtccggcatccgcaagctgcgcggccgctggatgggcttcgacaccggccggcgc
accgttccggcgctgccgacctaccacccggcctatctgctgcgcagcccgatcgagaag
cgcctcgcgtggcgcgacatgctctccgtccgggcgcggctcgccggcggcgatggcgcc
gcggaaccggaacgttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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