KEGG   Planctomyces sp. SH-PL62: VT85_18985
Entry
VT85_18985        CDS       T04401                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
plh  Planctomyces sp. SH-PL62
Pathway
plh00740  Riboflavin metabolism
plh01100  Metabolic pathways
plh01110  Biosynthesis of secondary metabolites
plh01240  Biosynthesis of cofactors
plh02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:plh00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    VT85_18985 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VT85_18985 (ribD)
Enzymes [BR:plh01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     VT85_18985 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     VT85_18985 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AMV39529
UniProt: A0A142YK34
Position
complement(4865710..4866897)
AA seq 395 aa
MNMRANRDVNESARARAWMGRALEEAARGRGRVEPNPMVGAVVVQGDELVAVGHHGRFGG
PHAEVVALEAAGGRARGATLYVTLEPCCHHGKTPPCTEAILGAGVSRVVAAHRDPFPKVA
GGGLARLRAAGVEVVVGAGAEAALALNAPYLKRLFTGFPYVIAKWAMTLDGKTAVAGGDS
RWISSAESRSLVHQVRGRMDAILVGVGTVIADDPQLTARPPGPRTPARIVLDSRARTPVD
STLVRTAREIPTILVVGGDAPSDAVNRLRESGCELLIDPGAERPSLDFLLGELGRRGMTN
LLVEGGGFVLGSFLDQGRVDEVDVYIAALLEGGDHARTAVRGRGRALMSDSLRLRDVRRS
FVGDDVRIQGEVPAAWREAMDRLSEPAPPDEADPS
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgaacatgcgagcgaatcgcgacgtgaacgagtcggcgcgtgcgcgggcgtggatggga
cgggctctcgaggaggccgcccgcgggcgcgggcgggtcgaaccgaatccgatggtcggg
gccgtggtggtgcagggcgacgaactcgtcgccgtcggtcatcacggccgtttcggcggg
ccgcacgcggaggtcgtcgctctggaagcggcgggggggcgtgcgcgcggggcgacgctc
tacgtcacgctcgaaccgtgctgccatcacggcaagaccccgccgtgcaccgaggcgatc
ctcggcgccggggtgtcgcgagtggtcgcagcccatcgcgacccgttcccgaaggtcgcc
ggcgggggtctggcccggctgagggcggcgggggtcgaggtcgtcgtcggcgcgggggcg
gaggccgccctggccctgaacgccccctacctgaagcggcttttcacgggctttccttat
gtgatcgccaagtgggccatgacgctggacggcaagacggccgtcgccggcggggacagc
cgttggatttcctcggccgaatcccggtctctcgtgcatcaggtccggggtcggatggac
gccatcctggtcggggtgggaaccgtgatcgccgacgatcctcaactcacggcgcggcct
cccggtccccgcacgccggcccgcatcgtgctggactcccgggcgcgcacccccgtcgat
tccaccctggtccgcacggcgcgcgagatccccacgatcctcgtggtcggcggtgacgcc
ccgagcgacgccgtgaaccgactgcgggaatcgggatgtgagcttctgatcgaccccggg
gcggagcggccttcgttggatttcctgctcggcgagctgggccggcggggtatgacgaat
ttgctcgtcgaagggggcggcttcgtcctcggctcctttctggaccagggccgagtcgac
gaggtcgacgtctacatcgcggccctcctcgaagggggcgaccacgcccggaccgccgtg
cgcgggcggggacgagccctgatgtccgattcgctccggctcagagacgtccgaaggtcg
ttcgtcggcgacgacgtccggatccagggggaggtcccggcggcctggcgcgaggcgatg
gacaggttgtccgagccggctcctccggacgaggccgatccgtcttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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