KEGG T04401: VT85

Planctomyces sp. SH-PL62: VT85_21530

Entry

VT85_21530        CDS       T04401

Symbol

rsmF

Name

(GenBank) Ribosomal RNA small subunit methyltransferase F

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

plh Planctomyces sp. SH-PL62

Brite

KEGG Orthology (KO) [BR:plh00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:plh03009]
    VT85_21530 (rsmF)
Enzymes [BR:plh01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     VT85_21530 (rsmF)
Ribosome biogenesis [BR:plh03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    VT85_21530 (rsmF)

SSDB

Motif

Pfam:

Methyltr_RsmB-F PCMT TMEM95

Other DBs

NCBI-ProteinID:

AMV40030

UniProt:

A0A142YME0

Position

5473828..5475333

AA seq 501 aa
MPRRDSRPPRHRSSSPGSKPPGGRPRPKTASGDRPKPPGGRPTFKTAPRGKTMPVLAGLI
ATIAPKVLRDVLDRGKRLESAIVDAQGDEAKKKSTRSDRMMINRSLASLVRWWGWIEPLK
LVHVEEQLLLAWLLDAPDLPAVPRLWASRSGRDPSRLFSGGDAPNWTARAETLKRFVAGR
TVAADPWMPFPNWLRDELPLPPGEESAKIRKLHFLHAVQAPPSLWVAVRGRPPKDVWNEL
HEDGLKPWVQRKIESAARLERDADLRRLESFQTGSLLVEDLGSQAVAKVCDPDPGERWWD
VGDGAGLFALGLADEMAGKGTIISTFEHEPSRLSAVKRLRSSPYTNVAAKTWDGRRPPGK
PESFDGVLVAPPSSGVGSWRRHPEVRWIIKADQLPELVARQKKLLALAATAVRPGGTLVY
TVGTVTLRETQGLINEFLEESPDFRLDPFPHPLEDGETTGMLQLWPQTHDCEARFIARLV
RTAKPSATPPTRTTGKNQPPS

NT seq 1506 nt +upstreamnt +downstreamnt
atgccccgcagagactcgcgtccccctcgccaccgctcctcgtcgcccggctcgaagccg
ccgggagggcggccccgccccaagacggcctccggcgaccgcccgaagcccccgggcgga
cggccgaccttcaagaccgccccgcgcggtaagaccatgccggtcctcgccggcctgatc
gccaccatcgcccccaaggtcctccgcgacgtcctggaccgcggcaagcggctcgaatcg
gcgatcgtcgacgcccagggcgacgaggccaagaagaagtccactcggtccgaccgcatg
atgatcaaccgatccctcgcctcgctggtgcgctggtggggctggatcgagcccctcaag
ctcgtgcacgtcgaggagcagctcctgctggcctggctgctcgacgcccccgacctgccg
gccgtcccccggctctgggccagccgctccggccgcgaccccagccgcctcttctccggc
ggcgacgcccccaactggacggcccgcgccgagaccctgaagcggttcgtcgccggccgc
accgtcgccgccgacccctggatgcccttcccgaactggctccgcgacgaactgccgctc
cccccgggagaggagtcggccaagatccgcaagctccacttcctccacgccgtccaggcc
cccccctcgctgtgggtcgccgtccgcggcaggccccccaaggacgtctggaacgaactc
cacgaggacggcctcaagccctgggtccagcgcaagatcgagtcggccgcccggctcgag
cgcgacgccgacctccgccgcctggagtcgttccagaccggctccctgctcgtcgaggac
ctgggctcgcaagccgtggccaaggtctgcgaccccgaccccggcgaacgctggtgggac
gtgggcgacggcgcggggctcttcgccctgggcctggccgacgagatggccggcaagggg
accatcatctcgaccttcgagcacgagccgtcccgcctctccgccgtcaagcggctccgc
tccagcccctacaccaacgtggccgccaagacctgggacggccgacgcccccccggcaag
cccgagagcttcgacggcgtcctcgtcgccccccccagctccggggtcggctcgtggcgc
cgccaccccgaggtccgctggatcatcaaggccgaccagctccccgaactcgtcgcccgc
cagaagaagctcctggccctcgccgcgacggccgtccgccccggcgggaccctggtctac
accgtcggcaccgtgaccctccgcgagacccagggcctcatcaacgagttcctcgaagaa
tcgcccgacttccgactcgacccgttcccgcacccgctggaagacggcgagaccaccggc
atgctccagctctggccccagacccacgactgcgaggcccgcttcatcgcccgattggtc
cgcaccgccaagccgtccgccaccccgccgaccaggacgaccgggaagaaccagccccct
tcgtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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